Hs04463065_cn

• Gene Symbol: PABPN1L
• Assay Reference Genome Location: Chr.16:88869327 on build GRCh38
• Cytoband: 16q24.3

Target Gene Details

• Entrez Gene ID: 390748
• Gene Name: poly(A) binding protein nuclear 1 like (cytoplasmic)
• Gene Aliases: PABPNL1, ePABP2
• Location: Chr.16:88862623-88870152 on Build GRCh38
• Assay Gene Location: Overlaps Intron 1 - Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PABPN1L	XM_017023230.1			XP_016878719.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv37n68	Chr.16:88767460 - 88944903 on Build GRCh38	Loss	LOC107987238 LOC100129697 LOC105371409 CDT1 PABPN1L APRT CBFA2T3 TRAPPC2L LOC101927793 PIEZO1 GALNS
nsv1063024	Chr.16:88707330 - 89238482 on Build GRCh38	Gain	LOC107987238 LOC100289580 LOC400558 PABPN1L MIR4722 APRT LINC00304 LOC101927793 LOC100129697 LOC339059 SLC22A31 LOC105371409 CDT1 CDH15 ACSF3 CTU2 ZNF778 CBFA2T3 TRAPPC2L PIEZO1 GALNS
nsv1928	Chr.16:88865211 - 88897277 on Build GRCh38	Insertion	PABPN1L CBFA2T3 LOC101927793
nsv471115	Chr.16:88801844 - 89197442 on Build GRCh38	Loss	LOC107987238 LOC400558 PABPN1L APRT LINC00304 LOC101927793 LOC100129697 SLC22A31 LOC105371409 CDT1 CDH15 ACSF3 CBFA2T3 TRAPPC2L GALNS
nsv573674	Chr.16:88738775 - 89325907 on Build GRCh38	Gain	LOC107987238 LOC100289580 LOC400558 PABPN1L LOC105371414 APRT LINC00304 LOC101927793 LOC100129697 LOC339059 LOC100287036 SLC22A31 ANKRD11 LOC105371409 CDT1 CDH15 ACSF3 ZNF778 CBFA2T3 TRAPPC2L PIEZO1 GALNS
esv3639555	Chr.16:88745961 - 88899576 on Build GRCh38	Gain	LOC107987238 CDT1 PABPN1L APRT CBFA2T3 TRAPPC2L LOC101927793 PIEZO1 GALNS
nsv521217	Chr.16:88805821 - 89174375 on Build GRCh38	Loss	LOC107987238 LOC400558 PABPN1L APRT LINC00304 LOC101927793 LOC100129697 LOC105371409 CDT1 CDH15 ACSF3 CBFA2T3 TRAPPC2L GALNS
nsv952071	Chr.16:88790893 - 89019992 on Build GRCh38	Deletion	LOC107987238 LOC100129697 LOC105371409 CDT1 PABPN1L APRT CBFA2T3 TRAPPC2L LOC101927793 GALNS
nsv482951	Chr.16:88633593 - 90228345 on Build GRCh38	Loss	SPG7 LOC100289580 LOC400558 PABPN1L SNAI3-AS1 MIR4722 IL17C LOC105371419 LINC00304 LOC100129697 SPATA2L RNF166 RPL13 LOC101927817 TCF25 SNAI3 CYBA CDH15 MVD PRDM7 DEF8 URAHP APRT ZNF276 LOC101927793 VPS9D1 FANCA MC1R LOC107984817 LOC105371409 GAS8 CENPBD1 ZNF778 GALNS LOC107987238 FAM157C TUBB3 DPEP1 LOC339059 LOC100287036 CPNE7 ACSF3 CTU2 VPS9D1-AS1 CBFA2T3 TRAPPC2L TUBB8P7 CDK10 CHMP1A LOC105371414 SPIRE2 SPATA33 DBNDD1 SLC22A31 ANKRD11 AFG3L1P CDT1 SNORD68 GAS8-AS1 PIEZO1
esv3639561	Chr.16:88837996 - 88882065 on Build GRCh38	Gain	PABPN1L CBFA2T3 TRAPPC2L GALNS
dgv3065n100	Chr.16:88711587 - 88927172 on Build GRCh38	Gain	LOC107987238 LOC100289580 PABPN1L MIR4722 APRT LOC101927793 LOC339059 CDT1 CTU2 CBFA2T3 TRAPPC2L PIEZO1 GALNS

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

translation initiation factor

Gene Ontology Categories:

Function(s)

nucleotide binding
RNA binding