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See other FCER2 CNV Assays ›
Gene Symbol
FCER2
Assay Reference Genome
Location

Chr.19:7691238 on build GRCh38
Cytoband
19p13.2
Assay ID Hs04489916_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 2208

Gene Name:

 Fc fragment of IgE receptor II

Gene Aliases:

 BLAST-2, CD23, CD23A, CLEC4J, FCE2, IGEBF

Location:

 Chr.19:7688757-7702755 on Build GRCh38

Assay Gene Location:

 Within Intron 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FCER2 NM_001207019.2 NP_001193948.2
NM_001220500.1 NP_001207429.1
NM_002002.4 NP_001993.2
XM_005272462.4 XP_005272519.1
AK223207.1 BAD96927.1
AK310071.1
BC014108.2 AAH14108.1
BC062591.1 AAH62591.1
M14766.1 AAA52435.1
M15059.1 AAA52434.1
X04772.1 CAA28465.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv953959 Chr.19:7669315 - 7700414 on Build GRCh38 Deletion MCEMP1 RETN FCER2 TRAPPC5
nsv833731 Chr.19:7589114 - 7739331 on Build GRCh38 Loss MCEMP1 RETN FCER2 XAB2 STXBP2 CLEC4G PET100 MIR6792 TRAPPC5 CAMSAP3 PCP2
esv8285 Chr.19:7691077 - 7691270 on Build GRCh38 Gain FCER2
nsv1060887 Chr.19:7089546 - 7861087 on Build GRCh38 Gain ZNF358 MCEMP1 PNPLA6 XAB2 STXBP2 CLEC4G C19orf45 MIR6792 TRAPPC5 LOC107985283 CD209 PEX11G RETN FCER2 CLEC4M ARHGEF18 EVI5L MCOLN1 PET100 INSR CAMSAP3 CLEC4GP1 PCP2 LOC100128573
dgv6248n54 Chr.19:7690993 - 7693584 on Build GRCh38 Loss FCER2
esv3388356 Chr.19:7690666 - 7693264 on Build GRCh38 Duplication FCER2
dgv6249n54 Chr.19:7691102 - 7692580 on Build GRCh38 Loss FCER2
nsv833732 Chr.19:7672656 - 7871329 on Build GRCh38 Gain CD209 PRR36 MCEMP1 FCER2 CLEC4M EVI5L CLEC4G TRAPPC5 CLEC4GP1
esv2751809 Chr.19:6896369 - 7816144 on Build GRCh38 Gain ZNF358 MCEMP1 XAB2 MIR6792 TRAPPC5 LOC729458 ZNF557 MBD3L4 PEX11G RETN FCER2 MBD3L5 MCOLN1 INSR CAMSAP3 PCP2 MBD3L2 PNPLA6 STXBP2 CLEC4G C19orf45 FLJ25758 LOC107985283 CD209 ADGRE4P MBD3L3 CLEC4M ARHGEF18 PET100 ADGRE1 CLEC4GP1 LOC100128573
nsv1061452 Chr.19:7657750 - 7785131 on Build GRCh38 Gain CD209 MCEMP1 RETN FCER2 CLEC4M CLEC4G TRAPPC5
esv26340 Chr.19:7690078 - 7698176 on Build GRCh38 Gain FCER2
nsv578522 Chr.19:7691153 - 7694144 on Build GRCh38 Loss FCER2

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More Information


Additional Information:

For this assay, SNP(s) [rs66508756,rs68063051] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

membrane traffic protein

Gene Ontology Categories:

Function(s) Process(es)


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