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See other FCER2 CNV Assays ›
Gene Symbol
FCER2
Assay Reference Genome
Location

Chr.19:7691238 on build GRCh38
Cytoband
19p13.2
Assay ID Hs04489916_cn
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Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 2208

Gene Name:

 Fc fragment of IgE receptor II

Gene Aliases:

 BLAST-2, CD23, CD23A, CLEC4J, FCE2, IGEBF

Location:

 Chr.19:7688757-7702755 on Build GRCh38

Assay Gene Location:

 Within Intron 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FCER2 NM_001207019.2 NP_001193948.2
NM_001220500.1 NP_001207429.1
NM_002002.4 NP_001993.2
XM_005272462.4 XP_005272519.1
AK223207.1 BAD96927.1
AK310071.1
BC014108.2 AAH14108.1
BC062591.1 AAH62591.1
M14766.1 AAA52435.1
M15059.1 AAA52434.1
X04772.1 CAA28465.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv953959 Chr.19:7669315 - 7700414 on Build GRCh38 Deletion FCER2 RETN MCEMP1 TRAPPC5
nsv833731 Chr.19:7589114 - 7739331 on Build GRCh38 Loss STXBP2 FCER2 PCP2 RETN CLEC4G XAB2 MIR6792 CAMSAP3 MCEMP1 PET100 TRAPPC5
esv8285 Chr.19:7691077 - 7691270 on Build GRCh38 Gain FCER2
nsv1060887 Chr.19:7089546 - 7861087 on Build GRCh38 Gain MCOLN1 ARHGEF18 PCP2 RETN LOC100128573 XAB2 INSR EVI5L CLEC4GP1 CAMSAP3 PET100 CLEC4M PEX11G STXBP2 FCER2 PNPLA6 CLEC4G CD209 ZNF358 MIR6792 LOC107985283 MCEMP1 TRAPPC5 C19orf45
dgv6248n54 Chr.19:7690993 - 7693584 on Build GRCh38 Loss FCER2
dgv6249n54 Chr.19:7691102 - 7692580 on Build GRCh38 Loss FCER2
esv3388356 Chr.19:7690666 - 7693264 on Build GRCh38 Duplication FCER2
nsv833732 Chr.19:7672656 - 7871329 on Build GRCh38 Gain FCER2 PRR36 CLEC4G CD209 EVI5L CLEC4GP1 MCEMP1 TRAPPC5 CLEC4M
esv2751809 Chr.19:6896369 - 7816144 on Build GRCh38 Gain MBD3L4 ARHGEF18 PCP2 LOC100128573 XAB2 INSR MBD3L2 PEX11G PNPLA6 CLEC4G ZNF557 CD209 ZNF358 MIR6792 MBD3L5 LOC107985283 MCEMP1 C19orf45 MCOLN1 LOC729458 RETN CLEC4GP1 CAMSAP3 PET100 MBD3L3 CLEC4M STXBP2 FCER2 ADGRE1 ADGRE4P FLJ25758 TRAPPC5
esv26340 Chr.19:7690078 - 7698176 on Build GRCh38 Gain FCER2
nsv1061452 Chr.19:7657750 - 7785131 on Build GRCh38 Gain FCER2 RETN CLEC4G CD209 MCEMP1 TRAPPC5 CLEC4M
nsv578518 Chr.19:7691153 - 7692089 on Build GRCh38 Loss FCER2

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More Information


Additional Information:

For this assay, SNP(s) [rs66508756,rs68063051] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

membrane traffic protein

Gene Ontology Categories:

Function(s) Process(es)


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