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See other ARID5A CNV Assays ›
Gene Symbol
ARID5A
Assay Reference Genome
Location

Chr.2:96540271 on build GRCh38
Cytoband
2q11.2
Assay ID Hs04574882_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 10865

Gene Name:

 AT-rich interaction domain 5A

Gene Aliases:

 MRF-1, MRF1, RP11-363D14

Location:

 Chr.2:96536719-96552638 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ARID5A NM_001319085.1 NP_001306014.1
NM_001319087.1 NP_001306016.1
NM_001319092.1 NP_001306021.1
NM_001319093.1 NP_001306022.1
NM_001319094.1 NP_001306023.1
NM_001319096.1 NP_001306025.1
NM_212481.2 NP_997646.1
XM_011510499.2 1 1574 XP_011508801.1
XM_017003183.1 XP_016858672.1
XM_017003184.1 XP_016858673.1
XM_017003185.1 XP_016858674.1
AK300173.1
AK304566.1
AK307768.1
BM556343.1
BX396215.2
BX648918.1
CR981009.1
HY002073.1
HY076710.1
M62324.1 AAA36325.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2720413 Chr.2:96472591 - 96793459 on Build GRCh38 Deletion FER1L5 NEURL3 KANSL3 LMAN2L LOC105373496 ARID5A CNNM4
dgv607e201 Chr.2:95855884 - 97561622 on Build GRCh38 Deletion NEURL3 ANKRD36B ADRA2B FAHD2CP STARD7-AS1 ANKRD36 MIR3127 STARD7 ANKRD36C LOC653924 ANKRD39 LOC100506123 ANKRD23 CNNM3 FAM178B FAHD2B ARID5A SEMA4C CNNM4 GPAT2 KANSL3 LOC105373495 SNRNP200 TMEM127 DUSP2 LOC101927053 ITPRIPL1 FER1L5 ASTL LMAN2L NCAPH LOC107984110 CIAO1 LOC105373496 LOC100506076
nsv1135873 Chr.2:95981454 - 97579645 on Build GRCh38 Deletion NEURL3 ANKRD36B ADRA2B FAHD2CP STARD7-AS1 ANKRD36 MIR3127 STARD7 ANKRD36C LOC653924 ANKRD39 LOC100506123 ANKRD23 CNNM3 FAM178B FAHD2B ARID5A SEMA4C CNNM4 GPAT2 KANSL3 LOC105373495 SNRNP200 TMEM127 DUSP2 LOC101927053 ITPRIPL1 FER1L5 ASTL LMAN2L NCAPH LOC107984110 CIAO1 LOC105373496 LOC100506076
esv3425717 Chr.2:95859900 - 97515905 on Build GRCh38 Duplication NEURL3 ANKRD36B ADRA2B FAHD2CP STARD7-AS1 ANKRD36 MIR3127 STARD7 ANKRD36C LOC653924 ANKRD39 LOC100506123 ANKRD23 CNNM3 FAM178B FAHD2B ARID5A SEMA4C CNNM4 GPAT2 KANSL3 LOC105373495 SNRNP200 TMEM127 DUSP2 LOC101927053 ITPRIPL1 FER1L5 ASTL LMAN2L NCAPH LOC107984110 CIAO1 LOC105373496 LOC100506076

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