Hs04861352_cn

• Gene Symbol: SPARCL1
• Assay Reference Genome Location: Chr.4:87474259 on build GRCh38
• Cytoband: 4q22.1

Target Gene Details

• Entrez Gene ID: 8404
• Gene Name: SPARC like 1
• Gene Aliases: MAST 9, MAST9, PIG33, SC1
• Location: Chr.4:87473330-87529503 on Build GRCh38
• Assay Gene Location: Within Intron 12

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SPARCL1	NM_001128310.2			NP_001121782.1
	NM_001291976.1			NP_001278905.1
	NM_001291977.1			NP_001278906.1
	NM_004684.5			NP_004675.3
	AK294335.1
	AK298039.1
	AK300956.1
	AK304494.1
	AK304628.1
	AK316533.1
	AL833430.1
	AY513278.1			AAT08031.1
	BC033721.1			AAH33721.1
	BX647713.1
	CA442598.1
	X82157.1			CAA57650.1
	X86693.1			CAA60386.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3601276	Chr.4:87422870 - 87515781 on Build GRCh38	Loss	NUDT9 SPARCL1
esv3601278	Chr.4:87455460 - 87496054 on Build GRCh38	Loss	NUDT9 SPARCL1
nsv1011882	Chr.4:87442807 - 87481325 on Build GRCh38	Gain	NUDT9 SPARCL1
nsv1002789	Chr.4:87318188 - 87685333 on Build GRCh38	Loss	DSPP NUDT9 HSD17B13 HSD17B11 DMP1 SPARCL1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

extracellular matrix glycoprotein

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding