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Gene Symbol
TAP1
Assay Reference Genome
Location

Chr.6:32849376 on build GRCh38
Cytoband
6p21.32
Assay ID Hs04888017_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 6890

Gene Name:

 transporter 1, ATP binding cassette subfamily B member

Gene Aliases:

 ABC17, ABCB2, APT1, D6S114E, PSF-1, PSF1, RING4, TAP1*0102N, TAP1N

Location:

 Chr.6:32845209-32853971 on Build GRCh38

Assay Gene Location:

 Within Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TAP1 NM_000593.5 NP_000584.2
NM_001292022.1 NP_001278951.1
AB012644.1 BAA32813.1
AK123494.1 1 767
AK302340.1
AK313762.1
AY523970.1 AAS55411.1
AY523971.2 AAS55412.1
BC014081.2 AAH14081.1
BX648013.1
KU178346.1
KU178347.1
L21204.1 AAC12902.1
L21205.1 AAC12903.1
L21206.1 AAC12904.1
L21207.1 AAC12905.1
L21208.1 AAC12906.1
X57521.1 CAA40740.1
X57522.1 CAA40741.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion LY6G6F CYP21A1P LOC100294145 VWA7 HLA-DRB5 FKBPL TNXB PSMB9 LTB CYP21A2 MSH5 HLA-DQB1 HLA-DQA1 C4B LOC102725068 BAG6 VPS52 MIR6833 MIR6721 ATP6V1G2-DDX39B MIR4646 SNORD52 HSD17B8 COL11A2 DDAH2 MIR6834 PPT2-EGFL8 VARS HCP5 CUTA HLA-DPB1 RING1 DDX39B-AS1 NFKBIL1 PBX2 HLA-DPA1 RGL2 EGFL8 RPS18 PSMB8-AS1 MIR6832 SNORA38 LTA HLA-DOB HLA-DRB6 LSM2 APOM C6orf47 LY6G6D NEU1 ZBTB12 WDR46 AIF1 TNXA LY6G5C PRRC2A SAPCD1-AS1 LY6G5B HSPA1A ATP6V1G2 PPP1R2P1 HCG23 PSMB8 HLA-DRA LOC100507547 SYNGAP1 HLA-DOA LST1 SKIV2L DAXX MIR6873 HCG24 HLA-DMA CSNK2B DDX39B SNORD117 C4A MIR5004 LOC101929163 BRD2 MCCD1 HLA-DQA2 C2-AS1 ZBTB22 HSPA1B KIFC1 PHF1 RXRB MICB AGER DXO HLA-DMB ZBTB9 HLA-DQB2 C6orf48 HLA-DQB1-AS1 PPT2 LY6G6E ATF6B SAPCD1 MIR219A1 NOTCH4 HCG26 SNORD84 GPSM3 PRRT1 SLC44A4 ABHD16A LOC100287329 C6orf25 MIR1236 RNF5 C2 NCR3 SNORD48 NELFE AGPAT1 EHMT2 CLIC1 TAP2 TAP1 C6orf10 HCG25 GPANK1 MSH5-SAPCD1 MIR3135B TNF BTNL2 HLA-DPB2 B3GALT4 CFB LY6G6C HLA-DRB1 TAPBP STK19 SLC39A7 HSPA1L PFDN6
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion LY6G6F CYP21A1P LOC100294145 VWA7 HLA-DRB5 FKBPL TNXB PSMB9 LTB CYP21A2 MSH5 HLA-DQB1 HLA-DQA1 C4B LOC102725068 BAG6 VPS52 MIR6833 MIR6721 ATP6V1G2-DDX39B MIR4646 SNORD52 HSD17B8 COL11A2 DDAH2 MIR6834 PPT2-EGFL8 VARS HCP5 CUTA HLA-DPB1 RING1 DDX39B-AS1 NFKBIL1 PBX2 HLA-DPA1 RGL2 EGFL8 RPS18 PSMB8-AS1 MIR6832 SNORA38 LTA HLA-DOB HLA-DRB6 LSM2 APOM C6orf47 LY6G6D NEU1 ZBTB12 WDR46 AIF1 TNXA LY6G5C PRRC2A SAPCD1-AS1 LY6G5B HSPA1A ATP6V1G2 PPP1R2P1 HCG23 PSMB8 HLA-DRA LOC100507547 SYNGAP1 HLA-DOA LST1 SKIV2L DAXX MIR6873 HCG24 HLA-DMA CSNK2B DDX39B SNORD117 C4A MIR5004 LOC101929163 BRD2 MCCD1 HLA-DQA2 C2-AS1 ZBTB22 HSPA1B KIFC1 PHF1 RXRB MICB AGER DXO HLA-DMB ZBTB9 HLA-DQB2 C6orf48 HLA-DQB1-AS1 PPT2 LY6G6E ATF6B SAPCD1 MIR219A1 NOTCH4 HCG26 SNORD84 GPSM3 PRRT1 SLC44A4 ABHD16A LOC100287329 C6orf25 MIR1236 RNF5 C2 NCR3 SNORD48 NELFE AGPAT1 EHMT2 CLIC1 TAP2 TAP1 C6orf10 HCG25 GPANK1 MSH5-SAPCD1 MIR3135B TNF BTNL2 HLA-DPB2 B3GALT4 CFB LY6G6C HLA-DRB1 TAPBP STK19 SLC39A7 HSPA1L PFDN6
nsv830633 Chr.6:32829085 - 32995634 on Build GRCh38 Loss HLA-DMB TAP2 PSMB9 PSMB8-AS1 TAP1 LOC100294145 HLA-DMA PPP1R2P1 BRD2 PSMB8
nsv1119076 Chr.6:32595823 - 33480623 on Build GRCh38 Deletion HLA-DPA1 RGL2 RPS18 PSMB8-AS1 LOC100294145 HLA-DOB BRD2 HLA-DQA2 TAP2 PSMB9 ZBTB22 TAP1 KIFC1 WDR46 HCG25 PHF1 HLA-DQB1 HLA-DQA1 VPS52 RXRB HSD17B8 HLA-DMB COL11A2 MIR6834 MIR3135B ZBTB9 HLA-DQB2 PPP1R2P1 PSMB8 HLA-DPB2 HLA-DQB1-AS1 SYNGAP1 HLA-DOA CUTA B3GALT4 DAXX MIR219A1 MIR6873 HLA-DPB1 HCG24 RING1 HLA-DMA TAPBP SLC39A7 MIR5004 PFDN6

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