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Gene Symbol
TAP1
Assay Reference Genome
Location

Chr.6:32849376 on build GRCh38
Cytoband
6p21.32
Assay ID Hs04888017_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 6890

Gene Name:

 transporter 1, ATP binding cassette subfamily B member

Gene Aliases:

 ABC17, ABCB2, APT1, D6S114E, PSF-1, PSF1, RING4, TAP1*0102N, TAP1N

Location:

 Chr.6:32845209-32853971 on Build GRCh38

Assay Gene Location:

 Within Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TAP1 NM_000593.5 NP_000584.2
NM_001292022.1 NP_001278951.1
AB012644.1 BAA32813.1
AK123494.1 1 767
AK302340.1
AK313762.1
AY523970.1 AAS55411.1
AY523971.2 AAS55412.1
BC014081.2 AAH14081.1
BX648013.1
KU178346.1
KU178347.1
L21204.1 AAC12902.1
L21205.1 AAC12903.1
L21206.1 AAC12904.1
L21207.1 AAC12905.1
L21208.1 AAC12906.1
X57521.1 CAA40740.1
X57522.1 CAA40741.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion TNXB LY6G6E LOC100507547 B3GALT4 ABHD16A DAXX HLA-DQB1-AS1 GPSM3 PPP1R2P1 HLA-DRB5 PPT2 C6orf47 NFKBIL1 SNORD48 MICB NCR3 TAP1 CYP21A1P SAPCD1 C4A HLA-DMA MSH5 HSPA1A MIR6721 MSH5-SAPCD1 CUTA SNORA38 ATP6V1G2 GPANK1 PSMB8 VWA7 NOTCH4 LOC100294145 ATP6V1G2-DDX39B HLA-DQB1 BAG6 FKBPL DDAH2 HLA-DPB2 SNORD84 COL11A2 STK19 HCG23 HLA-DRB6 ZBTB12 DDX39B-AS1 BRD2 RPS18 PRRT1 HLA-DOB SNORD117 HLA-DPB1 C6orf25 HCG25 AGER MIR6832 CFB PFDN6 HCG26 KIFC1 LOC101929163 MIR1236 MIR6833 LOC100287329 SNORD52 ZBTB9 EHMT2 C4B MIR5004 AIF1 LY6G6F VPS52 HSD17B8 C2 HLA-DQA1 EGFL8 PSMB8-AS1 RGL2 HLA-DPA1 PPT2-EGFL8 LTA LST1 LY6G5B LTB CYP21A2 PSMB9 LY6G6D HLA-DRB1 SKIV2L TNF HSPA1L SLC39A7 ZBTB22 HLA-DMB AGPAT1 APOM RNF5 NEU1 DXO NELFE SAPCD1-AS1 DDX39B HCP5 MIR6834 MIR219A1 RING1 LY6G5C CSNK2B SYNGAP1 HLA-DQB2 PBX2 VARS HCG24 LSM2 PHF1 SLC44A4 WDR46 LY6G6C TAPBP ATF6B RXRB HLA-DRA TAP2 TNXA C6orf48 MIR6873 C6orf10 MIR4646 CLIC1 HLA-DQA2 PRRC2A C2-AS1 BTNL2 LOC102725068 MCCD1 HSPA1B MIR3135B HLA-DOA
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion TNXB LY6G6E LOC100507547 B3GALT4 ABHD16A DAXX HLA-DQB1-AS1 GPSM3 PPP1R2P1 HLA-DRB5 PPT2 C6orf47 NFKBIL1 SNORD48 MICB NCR3 TAP1 CYP21A1P SAPCD1 C4A HLA-DMA MSH5 HSPA1A MIR6721 MSH5-SAPCD1 CUTA SNORA38 ATP6V1G2 GPANK1 PSMB8 VWA7 NOTCH4 LOC100294145 ATP6V1G2-DDX39B HLA-DQB1 BAG6 FKBPL DDAH2 HLA-DPB2 SNORD84 COL11A2 STK19 HCG23 HLA-DRB6 ZBTB12 DDX39B-AS1 BRD2 RPS18 PRRT1 HLA-DOB SNORD117 HLA-DPB1 C6orf25 HCG25 AGER MIR6832 CFB PFDN6 HCG26 KIFC1 LOC101929163 MIR1236 MIR6833 LOC100287329 SNORD52 ZBTB9 EHMT2 C4B MIR5004 AIF1 LY6G6F VPS52 HSD17B8 C2 HLA-DQA1 EGFL8 PSMB8-AS1 RGL2 HLA-DPA1 PPT2-EGFL8 LTA LST1 LY6G5B LTB CYP21A2 PSMB9 LY6G6D HLA-DRB1 SKIV2L TNF HSPA1L SLC39A7 ZBTB22 HLA-DMB AGPAT1 APOM RNF5 NEU1 DXO NELFE SAPCD1-AS1 DDX39B HCP5 MIR6834 MIR219A1 RING1 LY6G5C CSNK2B SYNGAP1 HLA-DQB2 PBX2 VARS HCG24 LSM2 PHF1 SLC44A4 WDR46 LY6G6C TAPBP ATF6B RXRB HLA-DRA TAP2 TNXA C6orf48 MIR6873 C6orf10 MIR4646 CLIC1 HLA-DQA2 PRRC2A C2-AS1 BTNL2 LOC102725068 MCCD1 HSPA1B MIR3135B HLA-DOA
nsv1119076 Chr.6:32595823 - 33480623 on Build GRCh38 Deletion PSMB8 B3GALT4 ZBTB9 MIR6834 MIR219A1 DAXX RING1 LOC100294145 MIR5004 HLA-DQB1-AS1 SYNGAP1 HLA-DQB1 HLA-DQB2 VPS52 HSD17B8 HCG24 HLA-DQA1 PHF1 PPP1R2P1 WDR46 HLA-DPB2 COL11A2 TAPBP PSMB8-AS1 RGL2 HLA-DPA1 RXRB TAP2 PSMB9 BRD2 RPS18 HLA-DOB TAP1 MIR6873 HLA-DPB1 HLA-DMA HLA-DQA2 HCG25 SLC39A7 ZBTB22 HLA-DMB PFDN6 KIFC1 CUTA MIR3135B HLA-DOA
nsv830633 Chr.6:32829085 - 32995634 on Build GRCh38 Loss PSMB8 HLA-DMB TAP2 PSMB9 BRD2 PPP1R2P1 TAP1 LOC100294145 HLA-DMA PSMB8-AS1

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