Hs04959649_cn

• Gene Symbol: USP42
• Assay Reference Genome Location: Chr.7:6083756 on build GRCh38
• Cytoband: 7p22.1

Target Gene Details

• Entrez Gene ID: 84132
• Gene Name: ubiquitin specific peptidase 42
• Gene Aliases: -
• Location: Chr.7:6078743-6161564 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
USP42	XM_006715791.2			XP_006715854.1
	XM_011515573.1			XP_011513875.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1034916	Chr.7:5895149 - 6119339 on Build GRCh38	Gain	RSPH10B EIF2AK1 PMS2 ANKRD61 USP42 CCZ1 AIMP2
esv2761130	Chr.7:6083054 - 6097232 on Build GRCh38	Loss	USP42
esv22984	Chr.7:6083632 - 6105086 on Build GRCh38	Loss	USP42
nsv436904	Chr.7:5035574 - 6713282 on Build GRCh38	Insertion	LOC100419773 RSPH10B EIF2AK1 RBAK-RBAKDN SLC29A4 DAGLB ZNF316 ZNF12 ZNF890P PMS2 ANKRD61 KDELR2 GRID2IP WIPI2 ZNF853 TNRC18 FBXL18 LOC221946 CYTH3 ZNF815P MIR589 LOC107986762 C7orf26 LOC100129484 RBAKDN USP42 CCZ1 MIR6874 AIMP2 FSCN1 FAM220A RNF216 RNF216-IT1 RAC1 ACTB ZDHHC4 OCM RBAK
esv3612014	Chr.7:6083376 - 6088614 on Build GRCh38	Loss	USP42
dgv1183e199	Chr.7:6081264 - 6105811 on Build GRCh38	Deletion	USP42
nsv1018388	Chr.7:5999082 - 6091538 on Build GRCh38	Gain	EIF2AK1 PMS2 ANKRD61 USP42 AIMP2
nsv5628	Chr.7:6065831 - 6107517 on Build GRCh38	Deletion	USP42

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

cysteine protease

Gene Ontology Categories:

Process(es)

ubiquitin-dependent protein catabolic process
spermatogenesis
protein deubiquitination
cell differentiation

Function(s)

thiol-dependent ubiquitin-specific protease activity
protein binding