Hs04964886_cn

• Gene Symbol: USP42
• Assay Reference Genome Location: Chr.7:6088755 on build GRCh38
• Cytoband: 7p22.1

Target Gene Details

• Entrez Gene ID: 84132
• Gene Name: ubiquitin specific peptidase 42
• Gene Aliases: -
• Location: Chr.7:6078743-6161564 on Build GRCh38
• Assay Gene Location: Within Intron 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
USP42	XM_006715791.2			XP_006715854.1
	XM_011515573.1			XP_011513875.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1034916	Chr.7:5895149 - 6119339 on Build GRCh38	Gain	CCZ1 PMS2 ANKRD61 RSPH10B AIMP2 EIF2AK1 USP42
esv2421713	Chr.7:6085750 - 6098480 on Build GRCh38	Deletion	USP42
esv2761130	Chr.7:6083054 - 6097232 on Build GRCh38	Loss	USP42
esv22984	Chr.7:6083632 - 6105086 on Build GRCh38	Loss	USP42
nsv436904	Chr.7:5035574 - 6713282 on Build GRCh38	Insertion	CCZ1 LOC100419773 RAC1 SLC29A4 LOC221946 FAM220A GRID2IP ZNF853 MIR6874 USP42 LOC107986762 ZNF316 WIPI2 FBXL18 AIMP2 RNF216 OCM TNRC18 ZDHHC4 EIF2AK1 FSCN1 RNF216-IT1 CYTH3 MIR589 RBAK-RBAKDN C7orf26 PMS2 RBAK ANKRD61 LOC100129484 RSPH10B ZNF890P ACTB RBAKDN DAGLB ZNF12 ZNF815P KDELR2
dgv1183e199	Chr.7:6081264 - 6105811 on Build GRCh38	Deletion	USP42
nsv1018388	Chr.7:5999082 - 6091538 on Build GRCh38	Gain	PMS2 ANKRD61 AIMP2 EIF2AK1 USP42
nsv5628	Chr.7:6065831 - 6107517 on Build GRCh38	Deletion	USP42

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

cysteine protease

Gene Ontology Categories:

Process(es)

ubiquitin-dependent protein catabolic process
spermatogenesis
protein deubiquitination
cell differentiation

Function(s)

thiol-dependent ubiquitin-specific protease activity
protein binding