Hs04978228_cn

• Gene Symbol: USP42
• Assay Reference Genome Location: Chr.7:6078937 on build GRCh38
• Cytoband: 7p22.1

Target Gene Details

• Entrez Gene ID: 84132
• Gene Name: ubiquitin specific peptidase 42
• Gene Aliases: -
• Location: Chr.7:6078743-6161564 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
USP42	XM_011515573.1			XP_011513875.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1034916	Chr.7:5895149 - 6119339 on Build GRCh38	Gain	CCZ1 ANKRD61 RSPH10B USP42 EIF2AK1 AIMP2 PMS2
nsv436904	Chr.7:5035574 - 6713282 on Build GRCh38	Insertion	ANKRD61 RBAKDN RBAK CYTH3 C7orf26 ZDHHC4 DAGLB LOC221946 LOC100419773 LOC100129484 ZNF890P FAM220A EIF2AK1 ZNF316 AIMP2 PMS2 RBAK-RBAKDN TNRC18 OCM CCZ1 RAC1 USP42 GRID2IP FBXL18 ZNF853 RNF216 WIPI2 LOC107986762 RNF216-IT1 FSCN1 SLC29A4 RSPH10B ZNF815P KDELR2 ACTB MIR6874 ZNF12 MIR589
esv3612013	Chr.7:6074187 - 6080058 on Build GRCh38	Loss	USP42
nsv1018388	Chr.7:5999082 - 6091538 on Build GRCh38	Gain	ANKRD61 USP42 EIF2AK1 AIMP2 PMS2
nsv5628	Chr.7:6065831 - 6107517 on Build GRCh38	Deletion	USP42

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

cysteine protease

Gene Ontology Categories:

Process(es)

ubiquitin-dependent protein catabolic process
spermatogenesis
protein deubiquitination
cell differentiation

Function(s)

thiol-dependent ubiquitin-specific protease activity
protein binding