Hs05078444_cn

• Gene Symbol: KDM4C
• Assay Reference Genome Location: Chr.9:6725298 on build GRCh38
• Cytoband: 9p24.1

Target Gene Details

• Entrez Gene ID: 23081
• Gene Name: lysine demethylase 4C
• Gene Aliases: GASC1, JHDM3C, JMJD2C, TDRD14C
• Location: Chr.9:6720863-7175648 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
KDM4C	NM_001146696.1			NP_001140168.1
	AK310439.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv831499	Chr.9:6723287 - 6930933 on Build GRCh38	Loss	KDM4C
dgv7391n100	Chr.9:6722102 - 6775107 on Build GRCh38	Loss	KDM4C
nsv466113	Chr.9:6672097 - 6731786 on Build GRCh38	Loss	KDM4C
esv3619434	Chr.9:6721914 - 6726802 on Build GRCh38	Gain	KDM4C
esv3891544	Chr.9:6703997 - 6739489 on Build GRCh38	Loss	KDM4C
esv32977	Chr.9:6694812 - 6743422 on Build GRCh38	Loss	KDM4C
nsv613252	Chr.9:6715730 - 7022554 on Build GRCh38	Gain	KDM4C
nsv471273	Chr.9:6673465 - 6739489 on Build GRCh38	Loss	KDM4C
nsv613208	Chr.9:6567841 - 7017391 on Build GRCh38	Gain	GLDC KDM4C
nsv1018845	Chr.9:6609578 - 6829592 on Build GRCh38	Gain	GLDC KDM4C
nsv1029665	Chr.9:5687332 - 6775107 on Build GRCh38	Gain	ERMP1 IL33 TPD52L3 UHRF2 RIC1 MLANA MIR4665 GLDC RANBP6 KDM4C KIAA2026
dgv7388n100	Chr.9:6542253 - 6874231 on Build GRCh38	Gain	GLDC KDM4C
esv2761485	Chr.9:6715049 - 6775119 on Build GRCh38	Gain	KDM4C
esv3576621	Chr.9:6607725 - 6745550 on Build GRCh38	Gain	GLDC KDM4C
nsv1021016	Chr.9:6701133 - 6770362 on Build GRCh38	Gain	KDM4C
nsv1033539	Chr.9:6566610 - 7022554 on Build GRCh38	Gain	GLDC KDM4C
nsv1016109	Chr.9:6712314 - 6924843 on Build GRCh38	Gain	KDM4C
nsv1023706	Chr.9:6619819 - 6745551 on Build GRCh38	Gain	GLDC KDM4C
esv2752308	Chr.9:6523060 - 6899149 on Build GRCh38	Gain	GLDC KDM4C
dgv7390n100	Chr.9:6656619 - 6745551 on Build GRCh38	Loss	KDM4C
nsv613212	Chr.9:6669474 - 6786734 on Build GRCh38	Gain	KDM4C
esv3619411	Chr.9:6620055 - 6757858 on Build GRCh38	Gain	GLDC KDM4C
nsv1030278	Chr.9:6669375 - 6741529 on Build GRCh38	Gain	KDM4C
esv2752309	Chr.9:6670448 - 6908200 on Build GRCh38	Gain	KDM4C
nsv982630	Chr.9:6672217 - 6796787 on Build GRCh38	Duplication	KDM4C
dgv12488n54	Chr.9:6620059 - 6750556 on Build GRCh38	Gain	GLDC KDM4C
esv2759661	Chr.9:6576991 - 6845561 on Build GRCh38	Loss	GLDC KDM4C

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

histone modifying enzyme

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
positive regulation of cell proliferation
histone H3-K9 demethylation
oxidation-reduction process

Function(s)

zinc ion binding
enzyme binding
histone demethylase activity
histone demethylase activity (H3-K9 specific)
androgen receptor binding
dioxygenase activity