Hs05083691_cn

• Gene Symbol: PHF2
• Assay Reference Genome Location: Chr.9:93586050 on build GRCh38
• Cytoband: 9q22.31

Target Gene Details

• Entrez Gene ID: 5253
• Gene Name: PHD finger protein 2
• Gene Aliases: CENP-35, GRC5, JHDM1E
• Location: Chr.9:93576627-93679587 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PHF2	NM_005392.3			NP_005383.3
	XM_005252051.2			XP_005252108.1
	XM_006717143.2			XP_006717206.1
	AF043725.1			AAD21791.1
	AL834263.1			CAD38938.1
	BC064613.1			AAH64613.1
	CB990295.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv509311	Chr.9:93580555 - 93696735 on Build GRCh38	Insertion	PHF2 LOC107987098 MIR548AU
nsv824984	Chr.9:93548651 - 93612740 on Build GRCh38	Gain	PHF2 MIR548AU FAM120A

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

liver development
transcription, DNA-templated
protein demethylation
histone H3-K9 demethylation
oxidation-reduction process
negative regulation of chromatin silencing at rDNA

Function(s)

transcription coactivator activity
iron ion binding
protein binding
zinc ion binding
histone demethylase activity
histone demethylase activity (H3-K9 specific)
methylated histone binding
dioxygenase activity