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See other FAM189A1 CNV Assays ›
Gene Symbol
FAM189A1
Assay Reference Genome
Location

Chr.15:29134672 on build GRCh38
Cytoband
15q13.1
Assay ID Hs05361815_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 23359

Gene Name:

 family with sequence similarity 189 member A1

Gene Aliases:

 TMEM228

Location:

 Chr.15:29120252-29570723 on Build GRCh38

Assay Gene Location:

 Within Intron 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FAM189A1 NM_015307.1 NP_056122.1
XM_011521407.2 XP_011519709.1
AB011146.1 BAA25500.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1040778 Chr.15:28689598 - 30515727 on Build GRCh38 Loss WHAMMP2 GOLGA8T GOLGA6L7P LOC105370746 LOC105370751 ULK4P3 NSMCE3 CHRFAM7A LOC101060569 LOC107984752 PDCD6IPP2 GOLGA8M DKFZP434L187 LOC100130111 TJP1 APBA2 LOC100289656 GOLGA8R FAM189A1 GOLGA8J
nsv515798 Chr.15:29068198 - 29146274 on Build GRCh38 Gain+Loss APBA2 FAM189A1
nsv471232 Chr.15:29087561 - 29139979 on Build GRCh38 Loss APBA2 FAM189A1
nsv527255 Chr.15:28754022 - 30074044 on Build GRCh38 Gain WHAMMP2 LOC100130111 GOLGA6L7P TJP1 APBA2 NSMCE3 LOC100289656 LOC107984752 PDCD6IPP2 FAM189A1
nsv1039798 Chr.15:28724126 - 30158154 on Build GRCh38 Gain WHAMMP2 GOLGA8T GOLGA6L7P ULK4P3 NSMCE3 LOC107984752 PDCD6IPP2 LOC100130111 TJP1 APBA2 LOC100289656 FAM189A1 GOLGA8J
nsv522597 Chr.15:28724519 - 30074044 on Build GRCh38 Loss WHAMMP2 LOC100130111 GOLGA6L7P TJP1 APBA2 NSMCE3 LOC100289656 LOC107984752 PDCD6IPP2 FAM189A1
nsv568675 Chr.15:29035149 - 29916451 on Build GRCh38 Gain LOC100130111 TJP1 APBA2 NSMCE3 FAM189A1
nsv524362 Chr.15:29089598 - 29155854 on Build GRCh38 Loss APBA2 FAM189A1

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More Information


Additional Information:

For this assay, SNP(s) [rs113139734] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

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