Hs05366557_cn

• Gene Symbol: NEO1
• Assay Reference Genome Location: Chr.15:73077484 on build GRCh38
• Cytoband: 15q24.1

Target Gene Details

• Entrez Gene ID: 4756
• Gene Name: neogenin 1
• Gene Aliases: IGDCC2, NGN, NTN1R2
• Location: Chr.15:73051715-73305206 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
NEO1	NM_001172623.1			NP_001166094.1
	NM_001172624.1			NP_001166095.1
	NM_002499.3			NP_002490.2
	XM_005254408.1			XP_005254465.1
	XM_011521628.2			XP_011519930.1
	XM_011521629.2			XP_011519931.1
	XM_011521630.2			XP_011519932.1
	XM_011521632.2			XP_011519934.1
	XM_011521633.2			XP_011519935.1
	XM_017022231.1			XP_016877720.1
	XM_017022232.1			XP_016877721.1
	XM_017022233.1			XP_016877722.1
	XM_017022234.1			XP_016877723.1
	XM_017022235.1			XP_016877724.1
	XM_017022236.1			XP_016877725.1
	XM_017022237.1			XP_016877726.1
	XM_017022238.1			XP_016877727.1
	BC117161.1
	BC143270.1
	BC143271.1
	DB458571.2
	DB478373.1
	U61262.1			AAB17263.1
	U72391.1			AAC51287.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv525462	Chr.15:73057292 - 73271154 on Build GRCh38	Loss	NEO1
nsv1121512	Chr.15:72670085 - 75273877 on Build GRCh38	Deletion	ADPGK-AS1 CYP1A1 LMAN1L NPTN CSK LOXL1-AS1 SCAMP5 PPCDC ISLR2 ARID3B SCAMP2 RPP25 CPLX3 LOC729739 SEMA7A C15orf39 UBL7-AS1 LOC283731 LOC107984728 MIR4513 ULK3 PML COX5A LOXL1 MIR6881 MPI EDC3 STOML1 LOC101929333 LOC105376731 GOLGA6A CCDC33 C15orf59 C15orf59-AS1 MIR6882 HCN4 CD276 NPTN-IT1 GOLGA6C LOC102723750 BBS4 ISLR CLK3 HIGD2B UBL7 REC114 FAM219B TBC1D21 NEO1 STRA6 CYP1A2 ADPGK LOC732265 CYP11A1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

cell adhesion
axon guidance
positive regulation of BMP signaling pathway
iron ion homeostasis

Function(s)

receptor activity
co-receptor binding