Hs05448190_cn

• Gene Symbol: CORO7
• Assay Reference Genome Location: Chr.16:4366368 on build GRCh38
• Cytoband: 16p13.3

Target Gene Details

• Entrez Gene ID: 79585
• Gene Name: coronin 7
• Gene Aliases: 0610011B16Rik, CRN7, POD1
• Location: Chr.16:4354542-4416961 on Build GRCh38
• Assay Gene Location: Within Intron 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CORO7	NM_001201472.1			NP_001188401.1
	NM_001201473.1			NP_001188402.1
	NM_024535.4			NP_078811.3
	AK025674.1			BAB15211.1
	AK094596.1
	AK097238.1
	AK294045.1
	AK296723.1
	AK296807.1
	AK303353.1
	AK309327.1
	AK309763.1
	BC117289.1
	BC117291.1

Target Gene Details

• Entrez Gene ID: 100529144
• Gene Name: CORO7-PAM16 readthrough
• Gene Aliases: -
• Location: Chr.16:4340251-4416961 on Build GRCh38
• Assay Gene Location: Within Intron 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CORO7-PAM16	NM_001201479.1			NP_001188408.1
	AL833954.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv471075	Chr.16:4317729 - 4395326 on Build GRCh38	Loss	PAM16 GLIS2-AS1 VASN CORO7 CORO7-PAM16 GLIS2
nsv1046986	Chr.16:4049000 - 5555721 on Build GRCh38	Gain	VASN NAGPA TFAP4 CORO7 GLYR1 ADCY9 C16orf71 LINC01569 DNAJA3 GLIS2-AS1 SRL SEPT12 MIR6769A PPL RBFOX1 NAGPA-AS1 UBN1 NUDT16L1 ANKS3 CORO7-PAM16 EEF2KMT GLIS2 NMRAL1 SMIM22 C16orf96 PAM16 SEC14L5 UBALD1 CDIP1 ZNF500 ALG1 MGRN1 C16orf89 LOC105371063 ROGDI HMOX2
nsv571274	Chr.16:4309420 - 4441189 on Build GRCh38	Gain	PAM16 DNAJA3 GLIS2-AS1 VASN CORO7 CORO7-PAM16 GLIS2
nsv527866	Chr.16:4206462 - 4412618 on Build GRCh38	Loss	PAM16 GLIS2-AS1 VASN TFAP4 SRL CORO7 CORO7-PAM16 LOC105371063 GLIS2 LINC01569
esv3584924	Chr.16:4330628 - 4469258 on Build GRCh38	Gain	PAM16 DNAJA3 VASN CORO7 CORO7-PAM16 GLIS2 NMRAL1
nsv520212	Chr.16:4354619 - 4390827 on Build GRCh38	Loss	VASN CORO7 CORO7-PAM16
esv23732	Chr.16:4340813 - 4476244 on Build GRCh38	Gain	PAM16 DNAJA3 VASN CORO7 CORO7-PAM16 NMRAL1 HMOX2

More Information

Additional Information:

For this assay, SNP(s) [rs139550185] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

non-motor actin binding protein

Gene Ontology Categories:

Process(es)

Golgi to endosome transport
protein transport
actin filament polymerization

Function(s)

actin binding
protein binding