Hs05478958_cn

• Gene Symbol: B3GNTL1
• Assay Reference Genome Location: Chr.17:82944789 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 146712
• Gene Name: UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1
• Gene Aliases: 3-Gn-T8, B3GNT8, BGnT-8, beta-1, beta3Gn-T8, beta3GnTL1
• Location: Chr.17:82942149-83051845 on Build GRCh38
• Assay Gene Location: Within Intron 19

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
B3GNTL1	NM_001009905.2			NP_001009905.1
	NM_001320742.1			NP_001307671.1
	NM_001320743.1			NP_001307672.1
	NR_135465.1
	NR_135466.1
	XM_006722272.3			XP_006722335.1
	XM_011523532.2			XP_011521834.1
	XM_011523535.1			XP_011521837.1
	XM_017024205.1			XP_016879694.1
	XM_017024206.1			XP_016879695.1
	AK054757.1
	AK126018.1
	AY304503.1			AAQ74775.1
	AY634364.1			AAT47555.1
	BC019623.1			AAH19623.1
	U79265.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1067553	Chr.17:82530808 - 83091923 on Build GRCh38	Loss	WDR45B FN3K FN3KRP LOC105376791 RAB40B ZNF750 TBCD LOC105371944 MIR4525 METRNL B3GNTL1 FOXK2 LOC101929552
dgv3296n100	Chr.17:82851564 - 83091923 on Build GRCh38	Gain	B3GNTL1 TBCD LOC105371944 METRNL
nsv428351	Chr.17:81152631 - 83064073 on Build GRCh38	Gain	RAB40B OGFOD3 TBCD MIR4525 PCYT2 FASN MCRIP1 ASPSCR1 LOC105376790 ACTG1 OXLD1 SECTM1 MIR6786 CCDC137 PPP1R27 CD7 FN3K CEP131 MAFG HGS ALYREF NARF HEXDC LOC105371944 SIRT7 SLC38A10 ARL16 B3GNTL1 GPS1 LINC00482 STRA13 LOC101929511 GCGR AATK-AS1 SLC25A10 P4HB BAHCC1 ANAPC11 LOC105376791 MIR4740 FSCN2 DCXR ZNF750 FOXK2 PDE6G TSPAN10 LRRC45 MIR3186 MRPL12 LOC100130370 RAC3 UTS2R WDR45B RFNG C17orf89 SNORD134 CSNK1D TEX19 TEPSIN NOTUM FN3KRP CCDC57 AATK DUS1L SLC16A3 MYADML2 MIR6787 TMEM105 FAAP100 LOC101929552 ARHGDIA MAFG-AS1 NPB C17orf62 PYCR1 NPLOC4 LOC105371925
nsv576217	Chr.17:82937869 - 82960820 on Build GRCh38	Loss	B3GNTL1 TBCD LOC105371944
dgv3297n100	Chr.17:82879855 - 83048753 on Build GRCh38	Gain	B3GNTL1 TBCD LOC105371944
nsv1057153	Chr.17:82876571 - 83091923 on Build GRCh38	Loss	B3GNTL1 TBCD LOC105371944 METRNL
esv3893052	Chr.17:82895301 - 83102003 on Build GRCh38	Gain	B3GNTL1 TBCD LOC105371944 METRNL
esv21913	Chr.17:81828123 - 83103548 on Build GRCh38	Gain+Loss	RAB40B OGFOD3 TBCD MIR4525 PCYT2 FASN MCRIP1 ASPSCR1 LOC105376790 SECTM1 PPP1R27 CD7 FN3K MAFG ALYREF NARF HEXDC LOC105371944 SIRT7 B3GNTL1 GPS1 STRA13 LOC101929511 P4HB ANAPC11 LOC105376791 DCXR ZNF750 METRNL FOXK2 LRRC45 RAC3 UTS2R WDR45B RFNG SNORD134 CSNK1D TEX19 NOTUM FN3KRP CCDC57 DUS1L SLC16A3 MYADML2 MIR6787 LOC101929552 ARHGDIA MAFG-AS1 NPB C17orf62 PYCR1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

glycosyltransferase

Gene Ontology Categories:

Function(s)

transferase activity, transferring glycosyl groups