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See other SPATA22 CNV Assays ›
Gene Symbol
SPATA22
Assay Reference Genome
Location

Chr.17:3460045 on build GRCh38
Cytoband
17p13.2
Assay ID Hs05482497_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84690

Gene Name:

 spermatogenesis associated 22

Gene Aliases:

 NYD-SP20, NYDSP20

Location:

 Chr.17:3440011-3513852 on Build GRCh38

Assay Gene Location:

 Within Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPATA22 NM_001170695.1 NP_001164166.1
NM_001170696.1 NP_001164167.1
NM_001170697.1 NP_001164168.1
NM_001170698.1 NP_001164169.1
NM_001170699.1 NP_001164170.1
NM_001321336.1 NP_001308265.1
NM_001321337.1 NP_001308266.1
NM_032598.4 NP_115987.2
AF367472.1 AAK53408.1
AK295299.1
AK301892.1
AY032684.1 AAK51120.1
AY035867.1 AAK61373.1
AY035868.1 AAK61374.1
BC029483.1 AAH29483.1
BG716998.1
BI463957.1
BP371122.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3892950 Chr.17:3131812 - 3577153 on Build GRCh38 Loss OR3A1 OR3A3 OR3A4P ASPA OR3A2 OR1A1 OR1E1 SPATA22 OR1D4 TRPV3 OR1E2 OR1A2 TRPV1
nsv1065489 Chr.17:2631416 - 3948349 on Build GRCh38 Gain OR1G1 OR3A1 OR3A3 OR3A4P ASPA P2RX5-TAX1BP3 OR3A2 NCBP3 SHPK ITGAE OR1D2 MIR6776 OR1E1 TAX1BP3 LOC105371592 OR1E2 ATP2A3 PAFAH1B1 EMC6 CAMKK1 LOC101927911 MIR1253 CTNS P2RX1 GSG2 RAP1GAP2 CCDC92B OR1A1 SPATA22 OR1D4 OR1D5 CLUH TRPV3 OR1A2 TRPV1 P2RX5 LOC105371591
nsv574232 Chr.17:3254715 - 3503170 on Build GRCh38 Gain OR3A1 OR1E1 OR3A3 OR3A4P SPATA22 ASPA OR3A2 OR1E2
esv2660206 Chr.17:2679367 - 3519614 on Build GRCh38 Deletion OR1G1 LOC101927911 OR3A1 MIR1253 OR3A3 OR3A4P ASPA OR3A2 OR1D2 RAP1GAP2 MIR6776 CCDC92B OR1A1 OR1E1 SPATA22 OR1D4 OR1D5 CLUH TRPV3 LOC105371592 OR1E2 OR1A2 PAFAH1B1 LOC105371591
nsv1055740 Chr.17:3381841 - 3890153 on Build GRCh38 Gain CAMKK1 CTNS OR3A3 ASPA P2RX5-TAX1BP3 OR3A2 NCBP3 SHPK ITGAE GSG2 OR1E1 TAX1BP3 SPATA22 TRPV3 OR1E2 TRPV1 P2RX5 EMC6
nsv528368 Chr.17:3459775 - 3507608 on Build GRCh38 Gain SPATA22 ASPA
nsv833341 Chr.17:3352243 - 3521390 on Build GRCh38 Loss OR1E1 OR3A3 SPATA22 ASPA OR3A2 TRPV3 OR1E2
nsv521277 Chr.17:3390044 - 3468885 on Build GRCh38 Gain OR1E1 OR3A3 SPATA22 OR1E2
nsv1060071 Chr.17:3398474 - 3633472 on Build GRCh38 Loss OR3A3 SPATA22 ASPA TRPV3 OR1E2 TRPV1 SHPK

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