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See other SPATA22 CNV Assays ›
Gene Symbol
SPATA22
Assay Reference Genome
Location

Chr.17:3449721 on build GRCh38
Cytoband
17p13.2
Assay ID Hs05488384_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84690

Gene Name:

 spermatogenesis associated 22

Gene Aliases:

 NYD-SP20, NYDSP20

Location:

 Chr.17:3440011-3513852 on Build GRCh38

Assay Gene Location:

 Within Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPATA22 NM_001170695.1 NP_001164166.1
NM_001170696.1 NP_001164167.1
NM_001170697.1 NP_001164168.1
NM_001170698.1 NP_001164169.1
NM_001170699.1 NP_001164170.1
NM_001321336.1 NP_001308265.1
NM_001321337.1 NP_001308266.1
NM_032598.4 NP_115987.2
AF367472.1 AAK53408.1
AK295299.1
AK301892.1
AY032684.1 AAK51120.1
AY035867.1 AAK61373.1
AY035868.1 AAK61374.1
BC029483.1 AAH29483.1
BG716998.1
BI463957.1
BP371122.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3892950 Chr.17:3131812 - 3577153 on Build GRCh38 Loss OR3A2 OR1A2 TRPV1 OR1D4 TRPV3 OR1E1 SPATA22 OR1A1 OR3A4P ASPA OR3A1 OR3A3 OR1E2
nsv1065489 Chr.17:2631416 - 3948349 on Build GRCh38 Gain CAMKK1 OR3A2 P2RX5 LOC101927911 CLUH SPATA22 MIR1253 OR1A1 ATP2A3 OR3A4P ASPA CTNS OR3A3 OR1D2 LOC105371591 SHPK PAFAH1B1 OR1A2 P2RX5-TAX1BP3 MIR6776 TRPV1 RAP1GAP2 OR1D4 GSG2 TRPV3 OR1E1 LOC105371592 EMC6 OR3A1 ITGAE P2RX1 OR1E2 NCBP3 OR1D5 TAX1BP3 CCDC92B OR1G1
nsv574232 Chr.17:3254715 - 3503170 on Build GRCh38 Gain SPATA22 OR3A2 OR3A4P ASPA OR3A1 OR3A3 OR1E2 OR1E1
esv2660206 Chr.17:2679367 - 3519614 on Build GRCh38 Deletion PAFAH1B1 OR3A2 OR1A2 MIR6776 RAP1GAP2 OR1D4 TRPV3 LOC101927911 OR1E1 CLUH LOC105371592 SPATA22 MIR1253 OR1A1 OR3A4P ASPA OR3A1 OR3A3 OR1D2 OR1E2 LOC105371591 OR1D5 CCDC92B OR1G1
nsv1055740 Chr.17:3381841 - 3890153 on Build GRCh38 Gain CAMKK1 OR3A2 P2RX5-TAX1BP3 P2RX5 TRPV1 GSG2 TRPV3 OR1E1 EMC6 SPATA22 ASPA CTNS ITGAE OR3A3 OR1E2 NCBP3 SHPK TAX1BP3
nsv833341 Chr.17:3352243 - 3521390 on Build GRCh38 Loss SPATA22 OR3A2 ASPA OR3A3 OR1E2 TRPV3 OR1E1
nsv574236 Chr.17:3390044 - 3459775 on Build GRCh38 Gain SPATA22 OR3A3 OR1E2 OR1E1
nsv1059413 Chr.17:3365789 - 3453922 on Build GRCh38 Loss SPATA22 OR3A2 OR3A3 OR1E2 OR1E1
nsv1060071 Chr.17:3398474 - 3633472 on Build GRCh38 Loss SPATA22 TRPV1 ASPA OR3A3 OR1E2 TRPV3 SHPK

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