Hs05501042_cn

• Gene Symbol: PGAP3
• Assay Reference Genome Location: Chr.17:39675494 on build GRCh38
• Cytoband: 17q12

Target Gene Details

• Entrez Gene ID: 93210
• Gene Name: post-GPI attachment to proteins 3
• Gene Aliases: AGLA546, CAB2, PERLD1, PP1498, hCOS16
• Location: Chr.17:39671122-39688070 on Build GRCh38
• Assay Gene Location: Within Intron 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PGAP3	NM_001291726.1			NP_001278655.1
	NM_001291728.1			NP_001278657.1
	NM_001291730.1			NP_001278659.1
	NM_001291732.1			NP_001278661.1
	NM_001291733.1			NP_001278662.1
	NM_033419.4			NP_219487.3
	XM_011525480.2			XP_011523782.1
	XM_011525481.2			XP_011523783.1
	AB088396.1			BAC55580.1
	AF217980.1			AAG17223.1
	AK057911.1
	AK075474.1			BAC11642.1
	AK289612.1
	AK294639.1
	AK301106.1
	AK314469.1
	AY358437.1			AAQ88803.1
	BC010652.1			AAH10652.2
	BG472165.1
	DC389056.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv528093	Chr.17:39657827 - 39709752 on Build GRCh38	Loss	ERBB2 PNMT STARD3 PGAP3 TCAP
nsv516757	Chr.17:39625596 - 39678288 on Build GRCh38	Loss	PPP1R1B PNMT STARD3 PGAP3 TCAP
dgv40n68	Chr.17:39536627 - 39726611 on Build GRCh38	Loss	PPP1R1B ERBB2 NEUROD2 CDK12 PNMT STARD3 MIR4728 PGAP3 TCAP

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

GPI anchor metabolic process
GPI anchor biosynthetic process

Function(s)

hydrolase activity, acting on ester bonds