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See other SPATA22 CNV Assays ›
Gene Symbol
SPATA22
Assay Reference Genome
Location

Chr.17:3466371 on build GRCh38
Cytoband
17p13.2
Assay ID Hs05508377_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84690

Gene Name:

 spermatogenesis associated 22

Gene Aliases:

 NYD-SP20, NYDSP20

Location:

 Chr.17:3440011-3513852 on Build GRCh38

Assay Gene Location:

 Within Intron 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPATA22 NM_001170695.1 NP_001164166.1
NM_001170696.1 NP_001164167.1
NM_001170697.1 NP_001164168.1
NM_001170698.1 NP_001164169.1
NM_001170699.1 NP_001164170.1
NM_001321336.1 NP_001308265.1
NM_001321337.1 NP_001308266.1
NM_032598.4 NP_115987.2
AF367472.1 AAK53408.1
AK295299.1
AK301892.1
AY032684.1 AAK51120.1
AY035867.1 AAK61373.1
AY035868.1 AAK61374.1
BC029483.1 AAH29483.1
BG716998.1
BI463957.1
BP371122.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3892950 Chr.17:3131812 - 3577153 on Build GRCh38 Loss OR3A1 OR1E1 ASPA OR3A4P OR1A2 OR1E2 OR1A1 OR3A3 SPATA22 TRPV3 TRPV1 OR3A2 OR1D4
nsv1065489 Chr.17:2631416 - 3948349 on Build GRCh38 Gain SHPK NCBP3 OR1G1 ASPA P2RX1 GSG2 OR1A2 CAMKK1 MIR1253 OR1D5 SPATA22 TRPV3 TRPV1 LOC101927911 OR1D2 EMC6 CLUH OR1D4 LOC105371592 ITGAE OR3A1 OR1E1 CCDC92B RAP1GAP2 OR3A4P TAX1BP3 OR1E2 OR1A1 OR3A3 CTNS P2RX5-TAX1BP3 ATP2A3 OR3A2 MIR6776 P2RX5 PAFAH1B1 LOC105371591
nsv574232 Chr.17:3254715 - 3503170 on Build GRCh38 Gain OR3A1 OR3A3 SPATA22 OR1E1 OR3A2 ASPA OR3A4P OR1E2
esv2660206 Chr.17:2679367 - 3519614 on Build GRCh38 Deletion OR3A1 OR1E1 OR1G1 CCDC92B ASPA RAP1GAP2 OR3A4P OR1A2 OR1E2 MIR1253 OR1A1 OR1D5 OR3A3 SPATA22 TRPV3 LOC101927911 OR1D2 OR3A2 MIR6776 CLUH OR1D4 PAFAH1B1 LOC105371591 LOC105371592
nsv1055740 Chr.17:3381841 - 3890153 on Build GRCh38 Gain ITGAE SHPK OR1E1 NCBP3 ASPA GSG2 TAX1BP3 CAMKK1 OR1E2 OR3A3 CTNS SPATA22 TRPV3 TRPV1 P2RX5-TAX1BP3 OR3A2 EMC6 P2RX5
nsv528368 Chr.17:3459775 - 3507608 on Build GRCh38 Gain SPATA22 ASPA
nsv833341 Chr.17:3352243 - 3521390 on Build GRCh38 Loss OR3A3 SPATA22 TRPV3 OR1E1 OR3A2 ASPA OR1E2
nsv521277 Chr.17:3390044 - 3468885 on Build GRCh38 Gain OR3A3 SPATA22 OR1E1 OR1E2
nsv1060071 Chr.17:3398474 - 3633472 on Build GRCh38 Loss OR3A3 SPATA22 TRPV3 TRPV1 SHPK ASPA OR1E2

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