Genomic Map
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Target Gene Details
Entrez Gene ID: | 5578 |
Gene Name: | protein kinase C alpha |
Gene Aliases: |
AAG6, PKC-alpha, PKCA, PRKACA |
Location: |
Chr.17:66302640-66810744 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| PRKCA | NM_002737.2 | NP_002728.1 | ||
| XM_017024836.1 | XP_016880325.1 | |||
| XM_017024841.1 | XP_016880330.1 | |||
| AB209475.1 | BAD92712.1 | |||
| AB451258.1 | ||||
| AB451383.1 | ||||
| AY633609.1 | AAV33302.1 | |||
| BC053321.1 | AAH53321.1 | |||
| BC109273.1 | AAI09274.1 | |||
| BC109274.1 | AAI09275.1 | |||
| LC151409.1 | ||||
| M22199.1 | AAA60098.1 | |||
| X52479.1 | CAA36718.1 |
Target Gene Details
Entrez Gene ID: | 101928001 |
Gene Name: | PRKCA antisense RNA 1 |
Gene Aliases: |
- |
Location: |
Chr.17:66398069-66416854 on Build GRCh38 |
Assay Gene Location: | Within Intron 3 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| PRKCA-AS1 | NR_110822.1 | |||
| AI201109.1 | ||||
| BG183684.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv575894 | Chr.17:66381708 - 66408004 on Build GRCh38 | Loss |
 PRKCA
PRKCA-AS1
|
| nsv833520 | Chr.17:66261176 - 66438257 on Build GRCh38 | Gain |
PRKCA
PRKCA-AS1
|
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Additional Information:
For this assay, SNP(s) [rs73333315] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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