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See other WRAP73 CNV Assays ›
Gene Symbol
WRAP73
Assay Reference Genome
Location

Chr.1:3636012 on build GRCh38
Cytoband
1p36.32
Assay ID Hs05727893_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 49856

Gene Name:

 WD repeat containing, antisense to TP73

Gene Aliases:

 WDR8

Location:

 Chr.1:3630767-3650107 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 5 - Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
WRAP73 NM_017818.3 NP_060288.3
XM_005244754.1 XP_005244811.1
XM_017001387.1 XP_016856876.1
AB034912.1 BAA92312.1
AK000437.1 BAA91164.1
AK225525.1
BC086311.1 AAH86311.1
BX537591.1 2 1963
EF494669.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv410 Chr.1:3635087 - 3667080 on Build GRCh38 Insertion WRAP73 TP73
nsv470687 Chr.1:3356499 - 3763210 on Build GRCh38 Loss PRDM16 CCDC27 ARHGEF16 MIR551A TP73-AS1 WRAP73 MEGF6 TPRG1L TP73
nsv545128 Chr.1:3630371 - 3700037 on Build GRCh38 Loss WRAP73 TP73
nsv1001715 Chr.1:3627619 - 3769754 on Build GRCh38 Loss CCDC27 TP73-AS1 WRAP73 TPRG1L TP73
esv3585042 Chr.1:3585575 - 4260083 on Build GRCh38 Gain SMIM1 CEP104 CCDC27 LINC01346 LRRC47 WRAP73 MEGF6 TPRG1L C1orf174 TP73 DFFB LINC01134 TP73-AS1
nsv1012423 Chr.1:3477686 - 4747449 on Build GRCh38 Gain SMIM1 CEP104 CCDC27 LINC01346 ARHGEF16 MIR551A LRRC47 WRAP73 MEGF6 TPRG1L C1orf174 TP73 DFFB LOC284661 LINC01134 AJAP1 TP73-AS1
nsv951959 Chr.1:3051037 - 3812036 on Build GRCh38 Deletion SMIM1 CCDC27 MIR4251 ARHGEF16 MIR551A LRRC47 WRAP73 MEGF6 TPRG1L TP73 LINC00982 LOC105378604 PRDM16 TP73-AS1
esv3585044 Chr.1:3611044 - 3637348 on Build GRCh38 Gain WRAP73 MEGF6 TPRG1L
esv3585045 Chr.1:3611161 - 3686920 on Build GRCh38 Gain WRAP73 MEGF6 TPRG1L TP73

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More Information


Additional Information:

For this assay, SNP(s) [rs200699124] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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