Hs05828310_cn

• Gene Symbol: SSFA2
• Assay Reference Genome Location: Chr.2:181900214 on build GRCh38
• Cytoband: 2q31.3

Target Gene Details

• Entrez Gene ID: 6744
• Gene Name: sperm specific antigen 2
• Gene Aliases: CS-1, CS1, KRAP, SPAG13
• Location: Chr.2:181891716-181930738 on Build GRCh38
• Assay Gene Location: Within Intron 6

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SSFA2	NM_001130445.2			NP_001123917.1
	NM_001287503.1			NP_001274432.1
	NM_001287504.1			NP_001274433.1
	NM_006751.6			NP_006742.2
	NR_109843.1
	XM_005246812.1			XP_005246869.1
	XM_005246813.1			XP_005246870.1
	XM_011511701.2			XP_011510003.1
	XM_017004782.1			XP_016860271.1
	AB067514.2
	AB116937.1			BAC81767.1
	AK097375.1			BAC05027.1
	AK291745.1
	AK304238.1
	BC028706.2			AAH28706.1
	BC052581.1			AAH52581.1
	BC064499.1			AAH64499.1
	BX647257.1
	BX647967.1
	BX648888.1
	CR749488.1			CAH18314.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv834479	Chr.2:181873756 - 182040717 on Build GRCh38	Gain	SSFA2 PPP1R1C
esv3593551	Chr.2:181846661 - 181930879 on Build GRCh38	Gain	SSFA2
esv3593549	Chr.2:181846220 - 181983097 on Build GRCh38	Loss	SSFA2 PPP1R1C
nsv834478	Chr.2:181790084 - 181978474 on Build GRCh38	Gain	SSFA2 PPP1R1C

More Information

Additional Information:

For this assay, SNP(s) [rs72891061] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Function(s)

receptor binding
actin filament binding