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See other ARID5A CNV Assays ›
Gene Symbol
ARID5A
Assay Reference Genome
Location

Chr.2:96541857 on build GRCh38
Cytoband
2q11.2
Assay ID Hs05840788_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 10865

Gene Name:

 AT-rich interaction domain 5A

Gene Aliases:

 MRF-1, MRF1, RP11-363D14

Location:

 Chr.2:96536719-96552638 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ARID5A NM_001319085.1 NP_001306014.1
NM_001319087.1 NP_001306016.1
NM_001319092.1 NP_001306021.1
NM_001319093.1 NP_001306022.1
NM_001319094.1 NP_001306023.1
NM_001319096.1 NP_001306025.1
NM_212481.2 NP_997646.1
XM_011510499.2 XP_011508801.1
XM_017003183.1 XP_016858672.1
XM_017003184.1 XP_016858673.1
XM_017003185.1 XP_016858674.1
AK300173.1
AK304566.1
AK307768.1
BM556343.1
BX396215.2
BX648918.1
CR981009.1
HY002073.1
HY076710.1
M62324.1 AAA36325.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2720413 Chr.2:96472591 - 96793459 on Build GRCh38 Deletion LMAN2L CNNM4 NEURL3 KANSL3 LOC105373496 FER1L5 ARID5A
dgv607e201 Chr.2:95855884 - 97561622 on Build GRCh38 Deletion ASTL FAM178B CIAO1 MIR3127 ANKRD36C LOC105373495 FER1L5 SNRNP200 LOC107984110 STARD7-AS1 NCAPH CNNM3 CNNM4 LOC100506123 ANKRD36B ANKRD23 LOC100506076 DUSP2 ADRA2B TMEM127 LOC653924 KANSL3 SEMA4C LOC105373496 ARID5A LMAN2L GPAT2 ANKRD39 ANKRD36 NEURL3 ITPRIPL1 FAHD2B STARD7 FAHD2CP LOC101927053
nsv1135873 Chr.2:95981454 - 97579645 on Build GRCh38 Deletion ASTL FAM178B CIAO1 MIR3127 ANKRD36C LOC105373495 FER1L5 SNRNP200 LOC107984110 STARD7-AS1 NCAPH CNNM3 CNNM4 LOC100506123 ANKRD36B ANKRD23 LOC100506076 DUSP2 ADRA2B TMEM127 LOC653924 KANSL3 SEMA4C LOC105373496 ARID5A LMAN2L GPAT2 ANKRD39 ANKRD36 NEURL3 ITPRIPL1 FAHD2B STARD7 FAHD2CP LOC101927053
esv3425717 Chr.2:95859900 - 97515905 on Build GRCh38 Duplication ASTL FAM178B CIAO1 MIR3127 ANKRD36C LOC105373495 FER1L5 SNRNP200 LOC107984110 STARD7-AS1 NCAPH CNNM3 CNNM4 LOC100506123 ANKRD36B ANKRD23 LOC100506076 DUSP2 ADRA2B TMEM127 LOC653924 KANSL3 SEMA4C LOC105373496 ARID5A LMAN2L GPAT2 ANKRD39 ANKRD36 NEURL3 ITPRIPL1 FAHD2B STARD7 FAHD2CP LOC101927053

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