Hs05855038_cn

• Gene Symbol: FER1L5
• Assay Reference Genome Location: Chr.2:96672971 on build GRCh38
• Cytoband: 2q11.2

Target Gene Details

• Entrez Gene ID: 90342
• Gene Name: fer-1 like family member 5
• Gene Aliases: -
• Location: Chr.2:96642719-96704887 on Build GRCh38
• Assay Gene Location: Within Intron 19

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
FER1L5	NM_001293083.1			NP_001280012.1
	XM_011512110.2			XP_011510412.1
	XM_011512111.2			XP_011510413.1
	XM_011512113.2			XP_011510415.1
	XM_011512114.2			XP_011510416.1
	XM_011512115.2			XP_011510417.1
	XM_011512116.2			XP_011510418.1
	XM_011512117.2			XP_011510419.1
	XM_011512118.2			XP_011510420.1
	XM_011512119.2			XP_011510421.1
	XM_011512120.2			XP_011510422.1
	XM_011512122.2			XP_011510424.1
	XM_011512124.2			XP_011510426.1
	XM_011512125.2			XP_011510427.1
	XM_011512126.2			XP_011510428.1
	XM_011512127.2			XP_011510429.1
	XM_011512128.2			XP_011510430.1
	XM_017005222.1			XP_016860711.1
	XM_017005223.1			XP_016860712.1
	AL133022.1
	AY461813.1			AAS19933.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2720413	Chr.2:96472591 - 96793459 on Build GRCh38	Deletion	ARID5A KANSL3 LOC105373496 NEURL3 FER1L5 CNNM4 LMAN2L
nsv469775	Chr.2:96575189 - 96746754 on Build GRCh38	Loss	KANSL3 FER1L5 LMAN2L
nsv526313	Chr.2:96667755 - 96994882 on Build GRCh38	Loss	SEMA4C ANKRD23 MIR3127 CNNM3 LOC101927053 FAM178B FER1L5 CNNM4 ANKRD39 LMAN2L
dgv607e201	Chr.2:95855884 - 97561622 on Build GRCh38	Deletion	ARID5A NCAPH LOC105373495 FAHD2CP NEURL3 LMAN2L MIR3127 ANKRD36 LOC100506123 LOC100506076 GPAT2 ANKRD36C ADRA2B CNNM4 SEMA4C ANKRD23 TMEM127 KANSL3 ITPRIPL1 STARD7 FAM178B LOC105373496 FER1L5 DUSP2 ANKRD36B CIAO1 STARD7-AS1 CNNM3 LOC101927053 FAHD2B LOC107984110 ASTL SNRNP200 ANKRD39 LOC653924
nsv834306	Chr.2:96575378 - 96747201 on Build GRCh38	Loss	KANSL3 FER1L5 LMAN2L
nsv834307	Chr.2:96655710 - 96813529 on Build GRCh38	Loss	MIR3127 FER1L5 CNNM4 LMAN2L
nsv1135873	Chr.2:95981454 - 97579645 on Build GRCh38	Deletion	ARID5A NCAPH LOC105373495 FAHD2CP NEURL3 LMAN2L MIR3127 ANKRD36 LOC100506123 LOC100506076 GPAT2 ANKRD36C ADRA2B CNNM4 SEMA4C ANKRD23 TMEM127 KANSL3 ITPRIPL1 STARD7 FAM178B LOC105373496 FER1L5 DUSP2 ANKRD36B CIAO1 STARD7-AS1 CNNM3 LOC101927053 FAHD2B LOC107984110 ASTL SNRNP200 ANKRD39 LOC653924
esv3425717	Chr.2:95859900 - 97515905 on Build GRCh38	Duplication	ARID5A NCAPH LOC105373495 FAHD2CP NEURL3 LMAN2L MIR3127 ANKRD36 LOC100506123 LOC100506076 GPAT2 ANKRD36C ADRA2B CNNM4 SEMA4C ANKRD23 TMEM127 KANSL3 ITPRIPL1 STARD7 FAM178B LOC105373496 FER1L5 DUSP2 ANKRD36B CIAO1 STARD7-AS1 CNNM3 LOC101927053 FAHD2B LOC107984110 ASTL SNRNP200 ANKRD39 LOC653924

More Information

Additional Information:

For this assay, SNP(s) [rs114903651] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

membrane trafficking regulatory protein

Gene Ontology Categories:

Process(es)

myoblast fusion