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See other SLC6A11 CNV Assays ›
Gene Symbol
SLC6A11
Assay Reference Genome
Location

Chr.3:10841967 on build GRCh38
Cytoband
3p25.3
Assay ID Hs05880036_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 6538

Gene Name:

 solute carrier family 6 member 11

Gene Aliases:

 GAT-3, GAT3, GAT4

Location:

 Chr.3:10816200-10940733 on Build GRCh38

Assay Gene Location:

 Within Intron 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC6A11 NM_014229.2 NP_055044.1
XM_011534033.2 XP_011532335.1
XM_017007073.1 XP_016862562.1
AK312719.1
S75989.1 AAB33570.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv436362 Chr.3:10048344 - 11860564 on Build GRCh38 Deletion LOC101927467 GHRLOS SLC6A1 HRH1 SLC6A1-AS1 VHL MIR378B VGLL4 GHRL MIR885 FANCD2 SLC6A11 LINC00852 SEC13 ATP2B2 TATDN2 BRK1 FANCD2OS ATG7 LINC00606 IRAK2 TAMM41 ATP2B2-IT2
dgv762e201 Chr.3:10008967 - 11913136 on Build GRCh38 Deletion LOC101927467 GHRLOS SLC6A1 HRH1 EMC3 SLC6A1-AS1 LOC401052 VHL TATDN2 ATG7 TAMM41 ATP2B2-IT2 FANCD2P2 CIDECP MIR378B VGLL4 GHRL MIR885 FANCD2 SLC6A11 LINC00852 SEC13 ATP2B2 BRK1 FANCD2OS LINC00606 IRAK2
nsv1121603 Chr.3:10071433 - 11889279 on Build GRCh38 Deletion LOC101927467 GHRLOS SLC6A1 HRH1 SLC6A1-AS1 VHL MIR378B VGLL4 GHRL MIR885 FANCD2 SLC6A11 LINC00852 SEC13 ATP2B2 TATDN2 BRK1 FANCD2OS ATG7 LINC00606 IRAK2 TAMM41 ATP2B2-IT2 FANCD2P2
nsv3696 Chr.3:10834085 - 10867396 on Build GRCh38 Insertion SLC6A11
nsv436869 Chr.3:10064456 - 11877985 on Build GRCh38 Insertion LOC101927467 GHRLOS SLC6A1 HRH1 SLC6A1-AS1 VHL MIR378B VGLL4 GHRL MIR885 FANCD2 SLC6A11 LINC00852 SEC13 ATP2B2 TATDN2 BRK1 FANCD2OS ATG7 LINC00606 IRAK2 TAMM41 ATP2B2-IT2 FANCD2P2
nsv1073204 Chr.3:9996548 - 11875005 on Build GRCh38 Deletion LOC101927467 GHRLOS SLC6A1 HRH1 EMC3 SLC6A1-AS1 LOC401052 VHL TATDN2 ATG7 EMC3-AS1 TAMM41 ATP2B2-IT2 FANCD2P2 CIDECP MIR378B VGLL4 GHRL MIR885 FANCD2 SLC6A11 LINC00852 SEC13 ATP2B2 BRK1 FANCD2OS LINC00606 IRAK2

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