Hs05996839_cn

• Gene Symbol: GALNT10
• Assay Reference Genome Location: Chr.5:154400433 on build GRCh38
• Cytoband: 5q33.2

Target Gene Details

• Entrez Gene ID: 55568
• Gene Name: polypeptide N-acetylgalactosaminyltransferase 10
• Gene Aliases: GALNACT10, PPGALNACT10, PPGANTASE10
• Location: Chr.5:154190735-154420984 on Build GRCh38
• Assay Gene Location: Within Intron 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GALNT10	NM_198321.3			NP_938080.1
	AB078145.1			BAC56890.1
	AJ505950.1			CAD44532.1
	AK023782.1			BAB14676.1
	AK127135.1
	BC072450.1			AAH72450.1
	BC098444.1			AAH98444.1

Target Gene Details

• Entrez Gene ID: 386627
• Gene Name: SAP30L antisense RNA 1 (head to head)
• Gene Aliases: GALNT10-AS1
• Location: Chr.5:154389769-154445822 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SAP30L-AS1	NR_037897.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv830520	Chr.5:154372285 - 154553755 on Build GRCh38	Loss	GALNT10 SAP30L-AS1 HAND1 SAP30L
nsv1015362	Chr.5:154215521 - 154450098 on Build GRCh38	Gain	GALNT10 SAP30L-AS1 MIR1294 SAP30L
nsv5080	Chr.5:154381371 - 154406233 on Build GRCh38	Insertion	GALNT10 SAP30L-AS1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

glycosyltransferase

Gene Ontology Categories:

Process(es)

protein O-linked glycosylation
O-glycan processing

Function(s)

polypeptide N-acetylgalactosaminyltransferase activity
carbohydrate binding
metal ion binding