Hs06149926_cn

• Gene Symbol: HS3ST5
• Assay Reference Genome Location: Chr.6:114068246 on build GRCh38
• Cytoband: 6q21

Target Gene Details

• Entrez Gene ID: 222537
• Gene Name: heparan sulfate-glucosamine 3-sulfotransferase 5
• Gene Aliases: 3-OST-5, 3OST5, HS3OST5, NBLA04021
• Location: Chr.6:114055586-114342388 on Build GRCh38
• Assay Gene Location: Within Intron 6

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
HS3ST5	XM_006715379.2			XP_006715442.1
	XM_011535588.2			XP_011533890.1
	XM_017010470.1			XP_016865959.1
	XM_017010471.1			XP_016865960.1
	XM_017010472.1			XP_016865961.1
	XM_017010473.1			XP_016865962.1
	XM_017010474.1			XP_016865963.1
	AK289907.1

Target Gene Details

• Entrez Gene ID: 101927768
• Gene Name: uncharacterized LOC101927768
• Gene Aliases: -
• Location: Chr.6:113969701-114340729 on Build GRCh38
• Assay Gene Location: Within Intron 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LOC101927768	NR_125845.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3610425	Chr.6:114067303 - 114068362 on Build GRCh38	Loss	HS3ST5 LOC101927768

More Information

Additional Information:

For this assay, SNP(s) [rs115629860] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

transferase

Gene Ontology Categories:

Process(es)

glycosaminoglycan biosynthetic process
protein sulfation
heparan sulfate proteoglycan biosynthetic process, enzymatic modification
regulation of viral entry into host cell
negative regulation of coagulation

Function(s)

protein binding
[heparan sulfate]-glucosamine 3-sulfotransferase 1 activity
3'-phosphoadenosine 5'-phosphosulfate binding