Genomic Map
Back To TopAssay Details
Target Gene Details
Entrez Gene ID: | 55031 |
Gene Name: | ubiquitin specific peptidase 47 |
Gene Aliases: |
TRFP |
Location: |
Chr.11:11841423-11959325 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| USP47 | NM_001282659.1 | NP_001269588.1 | ||
| NM_017944.3 | NP_060414.3 | |||
| XM_005252997.1 | XP_005253054.1 | |||
| XM_017017953.1 | XP_016873442.1 | |||
| AK027362.1 | BAB55063.1 | |||
| AK092290.1 | ||||
| AK127264.1 | ||||
| AK309240.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv1054113 | Chr.11:11828552 - 11953953 on Build GRCh38 | Loss |
 USP47
|
| nsv553538 | Chr.11:11847002 - 11864294 on Build GRCh38 | Loss |
USP47
|
| nsv483000 | Chr.11:10678454 - 12678453 on Build GRCh38 | Loss |
LOC105376554
TEAD1
CTR9
EIF4G2
ZBED5
MICALCL
ZBED5-AS1
LOC101928053
SNORD97
MICAL2
MIR6124
USP47
MRVI1
PARVA
GALNT18
MIR4299
LOC105376545
CSNK2A3
DKK3
MIR8070
|
| nsv832067 | Chr.11:11777158 - 11976774 on Build GRCh38 | Gain |
USP47
DKK3
MIR8070
|
| nsv832066 | Chr.11:11684853 - 11865904 on Build GRCh38 | Gain |
USP47
MIR8070
|
| dgv1656n54 | Chr.11:11854200 - 11865070 on Build GRCh38 | Loss |
USP47
|
| esv3579369 | Chr.11:11853475 - 11861994 on Build GRCh38 | Loss |
USP47
|
| nsv553543 | Chr.11:11854251 - 11870714 on Build GRCh38 | Loss |
USP47
|
Back To TopMore Information
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
Back To Top