Hs06412583_cn

• Gene Symbol: B3GNTL1
• Assay Reference Genome Location: Chr.17:82948600 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 146712
• Gene Name: UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1
• Gene Aliases: 3-Gn-T8, B3GNT8, BGnT-8, beta-1, beta3Gn-T8, beta3GnTL1
• Location: Chr.17:82942149-83051845 on Build GRCh38
• Assay Gene Location: Within Intron 18

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
B3GNTL1	NM_001009905.2			NP_001009905.1
	NM_001320742.1			NP_001307671.1
	NM_001320743.1			NP_001307672.1
	NR_135465.1
	NR_135466.1
	XM_006722272.3			XP_006722335.1
	XM_011523532.2			XP_011521834.1
	XM_011523535.1			XP_011521837.1
	XM_017024205.1			XP_016879694.1
	XM_017024206.1			XP_016879695.1
	AK054757.1
	AK126018.1	1	1349
	AY304503.1			AAQ74775.1
	AY634364.1			AAT47555.1
	BC019623.1			AAH19623.1
	BC110528.1	1	929	AAI10529.1
	BC110529.1	1	929	AAI10530.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1067553	Chr.17:82530808 - 83091923 on Build GRCh38	Loss	MIR4525 LOC105371944 B3GNTL1 FOXK2 RAB40B FN3KRP TBCD FN3K WDR45B LOC105376791 METRNL ZNF750 LOC101929552
dgv3296n100	Chr.17:82851564 - 83091923 on Build GRCh38	Gain	LOC105371944 B3GNTL1 TBCD METRNL
nsv428351	Chr.17:81152631 - 83064073 on Build GRCh38	Gain	ASPSCR1 SLC25A10 MRPL12 NOTUM LOC100130370 B3GNTL1 OXLD1 MIR6787 AATK-AS1 ARL16 ALYREF GPS1 CD7 SLC16A3 AATK ZNF750 DUS1L NARF MIR4525 PCYT2 PYCR1 OGFOD3 CSNK1D HGS PPP1R27 NPLOC4 LINC00482 LOC105371925 ACTG1 TBCD LOC105376790 GCGR CEP131 MIR4740 UTS2R TSPAN10 LOC105371944 ANAPC11 STRA13 TEPSIN LOC101929511 SECTM1 FOXK2 P4HB TEX19 RAB40B MAFG FSCN2 FN3KRP DCXR FASN CCDC137 MIR3186 SNORD134 PDE6G TMEM105 LOC101929552 SLC38A10 FAAP100 RAC3 CCDC57 C17orf89 C17orf62 MAFG-AS1 RFNG MYADML2 ARHGDIA MIR6786 HEXDC NPB SIRT7 LRRC45 MCRIP1 FN3K WDR45B LOC105376791 BAHCC1
nsv576217	Chr.17:82937869 - 82960820 on Build GRCh38	Loss	LOC105371944 B3GNTL1 TBCD
dgv3297n100	Chr.17:82879855 - 83048753 on Build GRCh38	Gain	LOC105371944 B3GNTL1 TBCD
nsv529032	Chr.17:82946968 - 82963153 on Build GRCh38	Loss	B3GNTL1
nsv1057153	Chr.17:82876571 - 83091923 on Build GRCh38	Loss	LOC105371944 B3GNTL1 TBCD METRNL
esv3893052	Chr.17:82895301 - 83102003 on Build GRCh38	Gain	LOC105371944 B3GNTL1 TBCD METRNL
nsv1063195	Chr.17:82947423 - 82998143 on Build GRCh38	Gain	B3GNTL1
esv21913	Chr.17:81828123 - 83103548 on Build GRCh38	Gain+Loss	ASPSCR1 NOTUM B3GNTL1 MIR6787 ALYREF GPS1 CD7 SLC16A3 ZNF750 DUS1L NARF MIR4525 PCYT2 PYCR1 OGFOD3 CSNK1D PPP1R27 TBCD LOC105376790 UTS2R LOC105371944 ANAPC11 STRA13 LOC101929511 SECTM1 FOXK2 P4HB TEX19 RAB40B MAFG FN3KRP DCXR FASN SNORD134 LOC101929552 RAC3 CCDC57 C17orf62 MAFG-AS1 RFNG MYADML2 ARHGDIA HEXDC NPB SIRT7 LRRC45 MCRIP1 FN3K WDR45B LOC105376791 METRNL

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

glycosyltransferase

Gene Ontology Categories:

Function(s)

transferase activity, transferring glycosyl groups