Hs06412583_cn

• Gene Symbol: B3GNTL1
• Assay Reference Genome Location: Chr.17:82948600 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 146712
• Gene Name: UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1
• Gene Aliases: 3-Gn-T8, B3GNT8, BGnT-8, beta-1, beta3Gn-T8, beta3GnTL1
• Location: Chr.17:82942149-83051845 on Build GRCh38
• Assay Gene Location: Within Intron 18

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
B3GNTL1	NM_001009905.2			NP_001009905.1
	NM_001320742.1			NP_001307671.1
	NM_001320743.1			NP_001307672.1
	NR_135465.1
	NR_135466.1
	XM_006722272.3			XP_006722335.1
	XM_011523532.2			XP_011521834.1
	XM_011523535.1			XP_011521837.1
	XM_017024205.1			XP_016879694.1
	XM_017024206.1			XP_016879695.1
	AK054757.1
	AK126018.1	1	1349
	AY304503.1			AAQ74775.1
	AY634364.1			AAT47555.1
	BC019623.1			AAH19623.1
	BC110528.1	1	929	AAI10529.1
	BC110529.1	1	929	AAI10530.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1067553	Chr.17:82530808 - 83091923 on Build GRCh38	Loss	B3GNTL1 TBCD MIR4525 LOC101929552 ZNF750 WDR45B FN3KRP METRNL LOC105376791 FOXK2 LOC105371944 FN3K RAB40B
dgv3296n100	Chr.17:82851564 - 83091923 on Build GRCh38	Gain	B3GNTL1 METRNL TBCD LOC105371944
nsv428351	Chr.17:81152631 - 83064073 on Build GRCh38	Gain	B3GNTL1 CCDC57 NPB LINC00482 MIR6786 TSPAN10 SIRT7 WDR45B RFNG FSCN2 P4HB ANAPC11 UTS2R FASN MIR6787 ASPSCR1 PYCR1 GCGR ACTG1 SLC16A3 TBCD MIR4740 C17orf89 PCYT2 MAFG-AS1 CCDC137 HGS STRA13 ZNF750 DUS1L MCRIP1 LOC105376791 TMEM105 GPS1 LOC105376790 AATK-AS1 HEXDC LOC105371944 FN3K DCXR OGFOD3 ALYREF AATK OXLD1 SNORD134 CD7 CEP131 NARF MIR4525 LOC101929552 MYADML2 BAHCC1 ARL16 CSNK1D LRRC45 MRPL12 FOXK2 FAAP100 TEX19 LOC100130370 RAB40B LOC101929511 LOC105371925 TEPSIN SECTM1 SLC25A10 ARHGDIA C17orf62 RAC3 PPP1R27 FN3KRP NOTUM MIR3186 SLC38A10 PDE6G NPLOC4 MAFG
nsv576217	Chr.17:82937869 - 82960820 on Build GRCh38	Loss	B3GNTL1 TBCD LOC105371944
nsv529032	Chr.17:82946968 - 82963153 on Build GRCh38	Loss	B3GNTL1
dgv3297n100	Chr.17:82879855 - 83048753 on Build GRCh38	Gain	B3GNTL1 TBCD LOC105371944
esv3893052	Chr.17:82895301 - 83102003 on Build GRCh38	Gain	B3GNTL1 METRNL TBCD LOC105371944
nsv1057153	Chr.17:82876571 - 83091923 on Build GRCh38	Loss	B3GNTL1 METRNL TBCD LOC105371944
nsv1063195	Chr.17:82947423 - 82998143 on Build GRCh38	Gain	B3GNTL1
esv21913	Chr.17:81828123 - 83103548 on Build GRCh38	Gain+Loss	B3GNTL1 CCDC57 NPB SIRT7 WDR45B RFNG P4HB ANAPC11 UTS2R FASN MIR6787 ASPSCR1 PYCR1 SLC16A3 TBCD PCYT2 MAFG-AS1 STRA13 ZNF750 DUS1L METRNL MCRIP1 LOC105376791 GPS1 LOC105376790 HEXDC LOC105371944 FN3K DCXR OGFOD3 ALYREF SNORD134 CD7 NARF MIR4525 LOC101929552 MYADML2 CSNK1D LRRC45 FOXK2 TEX19 RAB40B LOC101929511 SECTM1 ARHGDIA C17orf62 RAC3 PPP1R27 FN3KRP NOTUM MAFG

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

glycosyltransferase

Gene Ontology Categories:

Function(s)

transferase activity, transferring glycosyl groups