Genomic Map
Back To TopAssay Details
Target Gene Details
Entrez Gene ID: | 63976 |
Gene Name: | PR domain 16 |
Gene Aliases: |
CMD1LL, LVNC8, MEL1, PFM13 |
Location: |
Chr.1:3069025-3438621 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| PRDM16 | NM_022114.3 | NP_071397.3 | ||
| NM_199454.2 | NP_955533.2 | |||
| XM_005244772.4 | XP_005244829.1 | |||
| XM_005244773.4 | XP_005244830.1 | |||
| XM_005244774.4 | XP_005244831.1 | |||
| XM_006710814.3 | XP_006710877.1 | |||
| XM_017002050.1 | XP_016857539.1 | |||
| AB051462.2 | ||||
| AB078876.1 | BAB84297.1 | |||
| AF294278.1 | AAG33382.1 | |||
| BC161614.1 | ||||
| BQ897896.1 | ||||
| BX092842.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| esv3585038 | Chr.1:3092883 - 3220584 on Build GRCh38 | Gain |
 MIR4251
PRDM16
|
| nsv1013792 | Chr.1:3005296 - 3391724 on Build GRCh38 | Gain |
ACTRT2
LOC105378604
MIR4251
LINC00982
PRDM16
|
| nsv951959 | Chr.1:3051037 - 3812036 on Build GRCh38 | Deletion |
TP73
MIR551A
LRRC47
SMIM1
ARHGEF16
PRDM16
LOC105378604
MEGF6
MIR4251
WRAP73
CCDC27
LINC00982
TP73-AS1
TPRG1L
|
| nsv1000306 | Chr.1:3031140 - 3164376 on Build GRCh38 | Gain |
MIR4251
LINC00982
PRDM16
|
| dgv6e212 | Chr.1:3086912 - 3104831 on Build GRCh38 | Loss |
PRDM16
|
| esv3583359 | Chr.1:2777970 - 3286320 on Build GRCh38 | Gain |
ACTRT2
MIR4251
LINC00982
TTC34
PRDM16
|
| nsv428399 | Chr.1:2622539 - 3235926 on Build GRCh38 | Gain |
ACTRT2
MMEL1
MIR4251
LINC00982
TTC34
PRDM16
|
| dgv11n100 | Chr.1:2777886 - 3350773 on Build GRCh38 | Gain |
ACTRT2
LOC105378604
MIR4251
LINC00982
TTC34
PRDM16
|
| nsv545099 | Chr.1:3077074 - 3139312 on Build GRCh38 | Loss |
MIR4251
PRDM16
|
Back To TopMore Information
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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