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See other AGBL4 CNV Assays ›
Gene Symbol
AGBL4
Assay Reference Genome
Location

Chr.1:49265230 on build GRCh38
Cytoband
1p33
Assay ID Hs06558530_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 84871

Gene Name:

 ATP/GTP binding protein like 4

Gene Aliases:

 CCP6

Location:

 Chr.1:48520157-50024011 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
AGBL4 NM_001323573.1 NP_001310502.1
NM_001323574.1 NP_001310503.1
NM_001323575.1 NP_001310504.1
NM_032785.3 NP_116174.3
NR_136623.1
XM_011542308.2 XP_011540610.1
XM_011542310.2 XP_011540612.1
XM_017002595.1 XP_016858084.1
XM_017002596.1 XP_016858085.1
XM_017002597.1 XP_016858086.1
XM_017002598.1 XP_016858087.1
AK094826.1
AK294394.1
AK294633.1
AK296221.1

Target Gene Details

Entrez Gene ID:

 101929721

Gene Name:

 uncharacterized LOC101929721

Gene Aliases:

 -

Location:

 Chr.1:49257411-49269294 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC101929721 NR_125988.1
AK131006.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1011119 Chr.1:49177942 - 49289300 on Build GRCh38 Loss LOC101929721 AGBL4
nsv546194 Chr.1:49097909 - 49583818 on Build GRCh38 Loss LOC101929721 AGBL4-IT1 AGBL4
esv3577841 Chr.1:49011673 - 49272610 on Build GRCh38 Loss LOC101929721 AGBL4
nsv546195 Chr.1:49238414 - 49388176 on Build GRCh38 Loss LOC101929721 AGBL4-IT1 AGBL4

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More Information


Additional Information:

For this assay, SNP(s) [rs79089245] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

metalloprotease

Gene Ontology Categories:

Function(s) Process(es)


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