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See other PRDM16 CNV Assays ›
Gene Symbol
PRDM16
Assay Reference Genome
Location

Chr.1:3093160 on build GRCh38
Cytoband
1p36.32
Assay ID Hs06568569_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 63976

Gene Name:

 PR domain 16

Gene Aliases:

 CMD1LL, LVNC8, MEL1, PFM13

Location:

 Chr.1:3069025-3438621 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PRDM16 NM_022114.3 NP_071397.3
NM_199454.2 NP_955533.2
XM_005244772.4 XP_005244829.1
XM_005244773.4 XP_005244830.1
XM_005244774.4 XP_005244831.1
XM_006710814.3 XP_006710877.1
XM_017002050.1 XP_016857539.1
AB051462.2
AB078876.1 BAB84297.1
AF294278.1 AAG33382.1
BC161614.1
BQ897896.1
BX092842.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3585038 Chr.1:3092883 - 3220584 on Build GRCh38 Gain PRDM16 MIR4251
nsv829759 Chr.1:3006585 - 3094573 on Build GRCh38 Loss ACTRT2 PRDM16 LINC00982
nsv951959 Chr.1:3051037 - 3812036 on Build GRCh38 Deletion PRDM16 LRRC47 SMIM1 MEGF6 TPRG1L ARHGEF16 TP73 MIR551A MIR4251 TP73-AS1 LOC105378604 CCDC27 LINC00982 WRAP73
nsv1013792 Chr.1:3005296 - 3391724 on Build GRCh38 Gain ACTRT2 PRDM16 MIR4251 LOC105378604 LINC00982
dgv6e212 Chr.1:3086912 - 3104831 on Build GRCh38 Loss PRDM16
nsv1000306 Chr.1:3031140 - 3164376 on Build GRCh38 Gain PRDM16 MIR4251 LINC00982
esv3583359 Chr.1:2777970 - 3286320 on Build GRCh38 Gain ACTRT2 PRDM16 MIR4251 LINC00982 TTC34
dgv11n100 Chr.1:2777886 - 3350773 on Build GRCh38 Gain ACTRT2 PRDM16 MIR4251 LOC105378604 LINC00982 TTC34
nsv428399 Chr.1:2622539 - 3235926 on Build GRCh38 Gain ACTRT2 PRDM16 MMEL1 MIR4251 LINC00982 TTC34
nsv545099 Chr.1:3077074 - 3139312 on Build GRCh38 Loss PRDM16 MIR4251

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