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See other WRAP73 CNV Assays ›
Gene Symbol
WRAP73
Assay Reference Genome
Location

Chr.1:3644956 on build GRCh38
Cytoband
1p36.32
Assay ID Hs06587627_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 49856

Gene Name:

 WD repeat containing, antisense to TP73

Gene Aliases:

 WDR8

Location:

 Chr.1:3630767-3650107 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
WRAP73 NM_017818.3 NP_060288.3
XM_005244754.1 XP_005244811.1
XM_017001387.1 XP_016856876.1
AB034912.1 BAA92312.1
AK000437.1 BAA91164.1
AK225525.1
AK302397.1
BC086311.1 AAH86311.1
DC380547.1
EF494669.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv410 Chr.1:3635087 - 3667080 on Build GRCh38 Insertion TP73 WRAP73
nsv470687 Chr.1:3356499 - 3763210 on Build GRCh38 Loss TP73 TP73-AS1 TPRG1L WRAP73 CCDC27 MIR551A ARHGEF16 MEGF6 PRDM16
nsv545128 Chr.1:3630371 - 3700037 on Build GRCh38 Loss TP73 WRAP73
nsv1001715 Chr.1:3627619 - 3769754 on Build GRCh38 Loss TP73 TP73-AS1 TPRG1L WRAP73 CCDC27
esv3585042 Chr.1:3585575 - 4260083 on Build GRCh38 Gain SMIM1 C1orf174 TP73-AS1 DFFB LINC01346 LINC01134 TP73 LRRC47 CEP104 TPRG1L WRAP73 CCDC27 MEGF6
nsv1012423 Chr.1:3477686 - 4747449 on Build GRCh38 Gain SMIM1 LOC284661 C1orf174 TP73-AS1 DFFB LINC01346 LINC01134 ARHGEF16 TP73 LRRC47 CEP104 TPRG1L WRAP73 CCDC27 MIR551A AJAP1 MEGF6
nsv951959 Chr.1:3051037 - 3812036 on Build GRCh38 Deletion SMIM1 TP73-AS1 LOC105378604 MIR4251 ARHGEF16 PRDM16 TP73 LRRC47 TPRG1L WRAP73 LINC00982 CCDC27 MIR551A MEGF6
esv3585045 Chr.1:3611161 - 3686920 on Build GRCh38 Gain TP73 TPRG1L WRAP73 MEGF6

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More Information


Additional Information:

For this assay, SNP(s) [rs114491188] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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