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See other SLC6A1 CNV Assays ›
Gene Symbol
SLC6A1
Assay Reference Genome
Location

Chr.3:11004071 on build GRCh38
Cytoband
3p25.3
Assay ID Hs06613136_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 6529

Gene Name:

 solute carrier family 6 member 1

Gene Aliases:

 GABATHG, GABATR, GAT1, MAE

Location:

 Chr.3:10992718-11039249 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC6A1 NM_003042.3 NP_003033.3
XM_006713306.3 XP_006713369.1
BC033904.1 AAH33904.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv436362 Chr.3:10048344 - 11860564 on Build GRCh38 Deletion ATP2B2-IT2 BRK1 FANCD2OS MIR885 ATP2B2 IRAK2 SLC6A11 GHRL SLC6A1-AS1 LINC00852 LOC101927467 LINC00606 VGLL4 ATG7 SLC6A1 TAMM41 HRH1 VHL MIR378B SEC13 TATDN2 GHRLOS FANCD2
dgv762e201 Chr.3:10008967 - 11913136 on Build GRCh38 Deletion FANCD2OS MIR885 ATP2B2 IRAK2 SLC6A11 GHRL LINC00852 LOC101927467 LINC00606 ATG7 FANCD2P2 CIDECP SLC6A1 EMC3 HRH1 MIR378B TATDN2 GHRLOS ATP2B2-IT2 BRK1 LOC401052 SLC6A1-AS1 VGLL4 TAMM41 VHL SEC13 FANCD2
nsv1121603 Chr.3:10071433 - 11889279 on Build GRCh38 Deletion ATP2B2-IT2 BRK1 FANCD2OS MIR885 ATP2B2 IRAK2 SLC6A11 GHRL SLC6A1-AS1 LINC00852 LOC101927467 LINC00606 VGLL4 ATG7 FANCD2P2 SLC6A1 TAMM41 HRH1 VHL MIR378B SEC13 TATDN2 GHRLOS FANCD2
nsv436869 Chr.3:10064456 - 11877985 on Build GRCh38 Insertion ATP2B2-IT2 BRK1 FANCD2OS MIR885 ATP2B2 IRAK2 SLC6A11 GHRL SLC6A1-AS1 LINC00852 LOC101927467 LINC00606 VGLL4 ATG7 FANCD2P2 SLC6A1 TAMM41 HRH1 VHL MIR378B SEC13 TATDN2 GHRLOS FANCD2
nsv1073204 Chr.3:9996548 - 11875005 on Build GRCh38 Deletion FANCD2OS MIR885 ATP2B2 IRAK2 SLC6A11 GHRL LINC00852 LOC101927467 LINC00606 ATG7 FANCD2P2 CIDECP SLC6A1 EMC3 HRH1 MIR378B TATDN2 GHRLOS ATP2B2-IT2 BRK1 LOC401052 SLC6A1-AS1 VGLL4 EMC3-AS1 TAMM41 VHL SEC13 FANCD2

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