Hs06619785_cn

• Gene Symbol: FOXP1
• Assay Reference Genome Location: Chr.3:71295190 on build GRCh38
• Cytoband: 3p13

Target Gene Details

• Entrez Gene ID: 27086
• Gene Name: forkhead box P1
• Gene Aliases: 12CC4, HSPC215, MFH, QRF1, hFKH1B
• Location: Chr.3:70954714-71583989 on Build GRCh38
• Assay Gene Location: Within Intron 10

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
FOXP1	NM_001012505.1			NP_001012523.1
	NM_001244808.1			NP_001231737.1
	NM_001244810.1			NP_001231739.1
	NM_001244812.1			NP_001231741.1
	NM_001244816.1			NP_001231745.1
	NM_032682.5			NP_116071.2
	XM_005264737.4			XP_005264794.1
	XM_006713102.2			XP_006713165.1
	XM_006713103.2			XP_006713166.1
	XM_006713104.2			XP_006713167.1
	XM_011533584.2			XP_011531886.1
	XM_011533585.2			XP_011531887.1
	XM_017006165.1			XP_016861654.1
	XM_017006166.1			XP_016861655.1
	XM_017006168.1			XP_016861657.1
	AA380962.1
	AF146696.1			AAG47632.1
	AF250920.1			AAL56661.1
	AK092383.1			BAC03875.1
	AK122710.1
	BC005055.1			AAH05055.1
	BC054815.1			AAH54815.1
	BC071893.1			AAH71893.1
	BC080521.1			AAH80521.1
	BC131720.1

Target Gene Details

• Entrez Gene ID: 104502416
• Gene Name: FOXP1 antisense RNA 1
• Gene Aliases: -
• Location: Chr.3:71289758-71305854 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
FOXP1-AS1	NR_126463.1
	AA399395.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv999942	Chr.3:71131662 - 71736899 on Build GRCh38	Gain	MIR1284 FOXP1-AS1 FOXP1 EIF4E3
nsv1010076	Chr.3:71290647 - 71337382 on Build GRCh38	Gain	FOXP1-AS1 FOXP1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

negative regulation of B cell apoptotic process
transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
positive regulation of endothelial cell migration
osteoclast differentiation
response to lipopolysaccharide
regulation of tumor necrosis factor production
chemokine (C-C motif) ligand 2 secretion
osteoclast development
macrophage activation
monocyte activation
endothelial cell activation
regulation of monocyte differentiation
negative regulation of transcription, DNA-templated
positive regulation of smooth muscle cell proliferation
regulation of interleukin-1 beta secretion
regulation of inflammatory response
negative regulation of androgen receptor signaling pathway
T follicular helper cell differentiation
interleukin-21 secretion
regulation of defense response to bacterium
regulation of macrophage colony-stimulating factor production
regulation of endothelial tube morphogenesis
regulation of interleukin-12 secretion

Function(s)

RNA polymerase II transcription factor activity, sequence-specific DNA binding
protein binding
sequence-specific DNA binding
protein self-association
metal ion binding
androgen receptor binding