Hs06622077_cn

• Gene Symbol: HDAC11
• Assay Reference Genome Location: Chr.3:13501090 on build GRCh38
• Cytoband: 3p25.1

Target Gene Details

• Entrez Gene ID: 79885
• Gene Name: histone deacetylase 11
• Gene Aliases: HD11
• Location: Chr.3:13480171-13506424 on Build GRCh38
• Assay Gene Location: Within Intron 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
HDAC11	NM_001136041.2			NP_001129513.1
	NM_024827.3			NP_079103.2
	XM_005265491.1			XP_005265548.1
	XM_005265492.1			XP_005265549.1
	XM_006713338.1			XP_006713401.1
	XM_011534131.1			XP_011532433.1
	XM_011534132.2			XP_011532434.2
	XM_011534135.1			XP_011532437.1
	XM_017007234.1			XP_016862723.1
	AK025426.1			BAB15127.1
	AK025890.1			BAB15272.1
	AK293223.1
	AK299021.1
	AL137362.1			CAB70712.1
	AL834223.1			CAH56375.1
	BC009676.1			AAH09676.1
	BG708402.1
	CR457341.1			CAG33622.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv470416	Chr.3:13492082 - 13575549 on Build GRCh38	Loss	HDAC11 FBLN2
nsv1011766	Chr.3:13485961 - 14213016 on Build GRCh38	Gain	TPRXL CHCHD4 SNORA93 HDAC11 LSM3 XPC WNT7A FGD5P1 TMEM43 LINC00620 LOC100293612 FBLN2

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription, DNA-templated
oligodendrocyte development
chromatin modification
histone deacetylation
histone H3 deacetylation

Function(s)

histone deacetylase activity
transcription factor binding
NAD-dependent histone deacetylase activity (H3-K14 specific)