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See other SLC6A1 CNV Assays ›
Gene Symbol
SLC6A1
Assay Reference Genome
Location

Chr.3:11008522 on build GRCh38
Cytoband
3p25.3
Assay ID Hs06657759_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 6529

Gene Name:

 solute carrier family 6 member 1

Gene Aliases:

 GABATHG, GABATR, GAT1, MAE

Location:

 Chr.3:10992718-11039249 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC6A1 NM_003042.3 NP_003033.3
XM_006713306.3 XP_006713369.1
BC033904.1 AAH33904.1

Target Gene Details

Entrez Gene ID:

 100874090

Gene Name:

 SLC6A1 antisense RNA 1

Gene Aliases:

 -

Location:

 Chr.3:11006098-11019224 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC6A1-AS1 NR_046647.1
DA771774.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv436362 Chr.3:10048344 - 11860564 on Build GRCh38 Deletion FANCD2OS ATP2B2-IT2 FANCD2 TATDN2 HRH1 LINC00852 BRK1 MIR885 LINC00606 VGLL4 LOC101927467 SLC6A11 GHRL IRAK2 ATG7 MIR378B TAMM41 SEC13 SLC6A1 ATP2B2 VHL GHRLOS SLC6A1-AS1
dgv762e201 Chr.3:10008967 - 11913136 on Build GRCh38 Deletion ATP2B2-IT2 TATDN2 HRH1 MIR885 FANCD2P2 VGLL4 SLC6A11 EMC3 ATG7 MIR378B SEC13 CIDECP SLC6A1 ATP2B2 VHL FANCD2OS LOC401052 FANCD2 LINC00852 BRK1 LINC00606 LOC101927467 GHRL IRAK2 TAMM41 GHRLOS SLC6A1-AS1
nsv1121603 Chr.3:10071433 - 11889279 on Build GRCh38 Deletion FANCD2OS ATP2B2-IT2 FANCD2 TATDN2 HRH1 LINC00852 BRK1 MIR885 LINC00606 FANCD2P2 VGLL4 LOC101927467 SLC6A11 GHRL IRAK2 ATG7 MIR378B TAMM41 SEC13 SLC6A1 ATP2B2 VHL GHRLOS SLC6A1-AS1
nsv436869 Chr.3:10064456 - 11877985 on Build GRCh38 Insertion FANCD2OS ATP2B2-IT2 FANCD2 TATDN2 HRH1 LINC00852 BRK1 MIR885 LINC00606 FANCD2P2 VGLL4 LOC101927467 SLC6A11 GHRL IRAK2 ATG7 MIR378B TAMM41 SEC13 SLC6A1 ATP2B2 VHL GHRLOS SLC6A1-AS1
nsv1073204 Chr.3:9996548 - 11875005 on Build GRCh38 Deletion ATP2B2-IT2 TATDN2 HRH1 MIR885 FANCD2P2 VGLL4 SLC6A11 EMC3 ATG7 MIR378B SEC13 CIDECP SLC6A1 ATP2B2 VHL EMC3-AS1 FANCD2OS LOC401052 FANCD2 LINC00852 BRK1 LINC00606 LOC101927467 GHRL IRAK2 TAMM41 GHRLOS SLC6A1-AS1

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