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See other GTF2H4 CNV Assays ›
Gene Symbol
GTF2H4
Assay Reference Genome
Location

Chr.6:30911786 on build GRCh38
Cytoband
6p21.33
Assay ID Hs06745868_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 2968

Gene Name:

 general transcription factor IIH subunit 4

Gene Aliases:

 P52, TFB2, TFIIH

Location:

 Chr.6:30908200-30914103 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 9 - Intron 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GTF2H4 NM_001517.4 NP_001508.1
AK222607.1 BAD96327.1
AK298058.1
AK300239.1 8 904
AK309869.1 9 1065
BC004935.1 AAH04935.1
BC016302.2 AAH16302.1
BT007321.1 AAP35985.1
Y07595.1 CAA68870.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1074389 Chr.6:29116522 - 31446623 on Build GRCh38 Deletion GNL1 TUBB OR2H2 IFITM4P SFTA2 CCHCR1 GTF2H4 IER3 SNORD32B HLA-C TRIM15 NRM OR10C1 LOC554223 TRIM39-RPP21 PPP1R10 CDSN MDC1 OR14J1 POU5F1 TRIM31-AS1 MDC1-AS1 PSORS1C2 HLA-L PSORS1C1 HCG20 DHX16 HLA-B TRIM39 OR11A1 MIR877 ABCF1 HCG9 HCG27 LINC00243 OR5V1 PSORS1C3 HLA-E MOG OR2J2 HCG17 TCF19 LINC01015 TRIM10 C6orf136 DPCR1 TRIM40 MUC22 HCG4B MAS1L PPP1R18 TRIM26 C6orf15 OR12D2 RNF39 PRR3 OR2H1 HLA-F-AS1 HLA-F ATAT1 ZNRD1ASP HLA-G MRPS18B RPP21 MIR6891 DDR1 UBD GABBR1 HLA-A HLA-J LOC101929006 OR12D3 PPP1R11 TRIM31 ZNRD1 VARS2 HCG4 LOC105375014 ZFP57 MICA HCG18 MIR4640 HLA-K FLOT1 HCG22 HCG8 HLA-H MUC21
nsv601481 Chr.6:30454855 - 31316476 on Build GRCh38 Loss GNL1 TUBB TCF19 C6orf136 SFTA2 CCHCR1 DPCR1 GTF2H4 IER3 HLA-C MUC22 NRM PPP1R18 C6orf15 PRR3 ATAT1 MRPS18B DDR1 PPP1R10 CDSN MDC1 POU5F1 MDC1-AS1 PSORS1C2 PSORS1C1 HCG20 DHX16 VARS2 LOC105375014 MIR877 ABCF1 MIR4640 HCG27 LINC00243 PSORS1C3 FLOT1 HCG22 HLA-E MUC21
nsv1122126 Chr.6:28628023 - 31244023 on Build GRCh38 Deletion GNL1 TUBB OR2H2 LINC01556 IFITM4P SFTA2 CCHCR1 GTF2H4 IER3 SNORD32B TRIM15 HCG14 NRM LINC00533 OR10C1 LOC554223 TRIM39-RPP21 OR2B3 PPP1R10 CDSN TRIM27 MDC1 LINC01623 OR14J1 POU5F1 TRIM31-AS1 MDC1-AS1 PSORS1C2 HLA-L PSORS1C1 HCG20 DHX16 LOC100129636 TRIM39 OR11A1 MIR877 HCG16 ABCF1 HCG9 HCG27 LINC00243 OR5V1 PSORS1C3 OR2W1 HLA-E MOG OR2J2 HCG17 TCF19 LINC01015 TRIM10 C6orf136 DPCR1 TRIM40 MUC22 HCG4B MAS1L PPP1R18 TRIM26 C6orf15 OR12D2 RNF39 PRR3 OR2H1 HLA-F-AS1 HLA-F ATAT1 ZNRD1ASP HLA-G MRPS18B RPP21 DDR1 UBD GABBR1 HLA-A ZNF311 OR2J3 HLA-J LOC101929006 OR12D3 PPP1R11 TRIM31 ZNRD1 VARS2 HCG4 LOC105375014 ZFP57 HCG18 MIR4640 HLA-K FLOT1 HCG22 HCG8 HLA-H MUC21
nsv1144137 Chr.6:29720323 - 31338123 on Build GRCh38 Deletion GNL1 TUBB IFITM4P SFTA2 CCHCR1 GTF2H4 IER3 HLA-C TRIM15 NRM LOC554223 TRIM39-RPP21 PPP1R10 CDSN MDC1 POU5F1 TRIM31-AS1 MDC1-AS1 PSORS1C2 HLA-L PSORS1C1 HCG20 DHX16 TRIM39 MIR877 ABCF1 HCG9 HCG27 LINC00243 PSORS1C3 HLA-E HCG17 TCF19 TRIM10 C6orf136 DPCR1 TRIM40 MUC22 HCG4B PPP1R18 TRIM26 C6orf15 RNF39 PRR3 HLA-F-AS1 HLA-F ATAT1 ZNRD1ASP HLA-G MRPS18B RPP21 DDR1 HLA-A HLA-J PPP1R11 TRIM31 ZNRD1 VARS2 HCG4 LOC105375014 HCG18 MIR4640 HLA-K FLOT1 HCG22 HCG8 HLA-H MUC21
esv3608518 Chr.6:30889700 - 30987504 on Build GRCh38 Gain SFTA2 MIR4640 DPCR1 GTF2H4 MUC21 DDR1 VARS2
nsv601264 Chr.6:29883666 - 31320716 on Build GRCh38 Loss GNL1 TUBB SFTA2 CCHCR1 GTF2H4 IER3 HLA-C TRIM15 NRM TRIM39-RPP21 PPP1R10 CDSN MDC1 POU5F1 TRIM31-AS1 MDC1-AS1 PSORS1C2 HLA-L PSORS1C1 HCG20 DHX16 TRIM39 MIR877 ABCF1 HCG9 HCG27 LINC00243 PSORS1C3 HLA-E HCG17 TCF19 TRIM10 C6orf136 DPCR1 TRIM40 MUC22 HCG4B PPP1R18 TRIM26 C6orf15 RNF39 PRR3 ATAT1 ZNRD1ASP MRPS18B RPP21 DDR1 HLA-A HLA-J PPP1R11 TRIM31 ZNRD1 VARS2 LOC105375014 HCG18 MIR4640 HLA-K FLOT1 HCG22 HCG8 HLA-H MUC21
esv2731791 Chr.6:30404802 - 31346410 on Build GRCh38 Deletion GNL1 TUBB TCF19 C6orf136 SFTA2 CCHCR1 DPCR1 GTF2H4 IER3 HLA-C MUC22 NRM PPP1R18 C6orf15 PRR3 ATAT1 MRPS18B DDR1 PPP1R10 CDSN MDC1 POU5F1 MDC1-AS1 PSORS1C2 PSORS1C1 HCG20 DHX16 VARS2 LOC105375014 MIR877 ABCF1 MIR4640 HCG27 LINC00243 PSORS1C3 FLOT1 HCG22 HLA-E MUC21
esv2670269 Chr.6:30498650 - 31067145 on Build GRCh38 Deletion GNL1 TUBB C6orf136 SFTA2 DPCR1 GTF2H4 IER3 MUC22 NRM PPP1R18 PRR3 ATAT1 MRPS18B DDR1 PPP1R10 MDC1 MDC1-AS1 HCG20 DHX16 VARS2 LOC105375014 MIR877 ABCF1 MIR4640 LINC00243 FLOT1 HCG22 MUC21
esv3411275 Chr.6:29981607 - 31490616 on Build GRCh38 Duplication GNL1 TUBB SFTA2 CCHCR1 GTF2H4 IER3 HLA-C TRIM15 NRM TRIM39-RPP21 PPP1R10 CDSN MDC1 POU5F1 TRIM31-AS1 MDC1-AS1 PSORS1C2 LOC102725068 HLA-L PSORS1C1 HCG20 DHX16 HLA-B TRIM39 MIR877 HCG26 ABCF1 HCG27 LINC00243 PSORS1C3 HLA-E HCG17 TCF19 TRIM10 C6orf136 DPCR1 TRIM40 MUC22 PPP1R18 TRIM26 C6orf15 RNF39 PRR3 ATAT1 ZNRD1ASP MRPS18B RPP21 MIR6891 DDR1 HLA-J PPP1R11 TRIM31 ZNRD1 VARS2 LOC105375014 HCP5 MICA HCG18 MIR4640 FLOT1 HCG22 HCG8 MUC21
nsv525438 Chr.6:30897052 - 30966198 on Build GRCh38 Gain SFTA2 DPCR1 GTF2H4 DDR1 VARS2
nsv1031677 Chr.6:30889765 - 31005088 on Build GRCh38 Gain SFTA2 MIR4640 DPCR1 GTF2H4 MUC21 DDR1 VARS2

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