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See other ATAT1 CNV Assays ›
Gene Symbol
ATAT1
Assay Reference Genome
Location

Chr.6:30644882 on build GRCh38
Cytoband
6p21.33
Assay ID Hs06780182_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 79969

Gene Name:

 alpha tubulin acetyltransferase 1

Gene Aliases:

 C6orf134, MEC17, Nbla00487, TAT, alpha-TAT, alpha-TAT1

Location:

 Chr.6:30626842-30646823 on Build GRCh38

Assay Gene Location:

 Within Intron 11
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATAT1 NM_001031722.3 NP_001026892.1
NR_033823.2
XM_005249415.2 XP_005249472.1
XM_011514918.2 XP_011513220.1
XM_017011316.1 XP_016866805.1
BC025755.1 AAH25755.1
BC047303.1 AAH47303.1
CX786272.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1074389 Chr.6:29116522 - 31446623 on Build GRCh38 Deletion TRIM26 MIR4640 C6orf15 MICA HLA-J IER3 TRIM39 ZNRD1 PSORS1C1 GABBR1 PPP1R11 TRIM31 HCG22 HCG17 HLA-L SFTA2 CCHCR1 ABCF1 MUC22 CDSN OR2H2 UBD DPCR1 IFITM4P GTF2H4 HLA-B OR10C1 HLA-K HCG9 LINC00243 HLA-C PSORS1C2 LINC01015 DDR1 PPP1R18 SNORD32B MRPS18B TRIM10 FLOT1 HCG27 TUBB LOC554223 HLA-H PSORS1C3 PPP1R10 HLA-F-AS1 GNL1 RPP21 DHX16 HCG4B MOG OR12D2 C6orf136 LOC101929006 HCG20 POU5F1 OR2H1 VARS2 TRIM15 OR11A1 TRIM39-RPP21 ZNRD1ASP TRIM40 HCG4 ATAT1 MIR877 MUC21 NRM HCG8 MDC1 HLA-F HLA-G HCG18 PRR3 LOC105375014 OR2J2 MAS1L MIR6891 ZFP57 OR14J1 RNF39 HLA-E OR12D3 MDC1-AS1 TRIM31-AS1 HLA-A TCF19 OR5V1
nsv830626 Chr.6:30590287 - 30765128 on Build GRCh38 Loss MDC1 ABCF1 PPP1R10 DHX16 IER3 C6orf136 HCG20 PPP1R18 MDC1-AS1 MRPS18B ATAT1 FLOT1 NRM TUBB
nsv601481 Chr.6:30454855 - 31316476 on Build GRCh38 Loss MIR4640 C6orf15 PSORS1C3 PPP1R10 GNL1 DHX16 IER3 C6orf136 HCG20 POU5F1 VARS2 PSORS1C1 HCG22 ATAT1 MIR877 MUC21 NRM MDC1 SFTA2 CCHCR1 ABCF1 PRR3 MUC22 LOC105375014 CDSN DPCR1 GTF2H4 LINC00243 HLA-C HLA-E PSORS1C2 DDR1 PPP1R18 MDC1-AS1 MRPS18B TCF19 FLOT1 HCG27 TUBB
nsv1122126 Chr.6:28628023 - 31244023 on Build GRCh38 Deletion TRIM26 MIR4640 OR2W1 C6orf15 LOC100129636 LINC01556 HLA-J IER3 TRIM39 ZNRD1 PSORS1C1 GABBR1 PPP1R11 TRIM31 HCG22 HCG17 HLA-L SFTA2 CCHCR1 ABCF1 MUC22 LINC00533 CDSN OR2J3 OR2H2 UBD DPCR1 IFITM4P GTF2H4 OR10C1 HLA-K HCG9 LINC00243 PSORS1C2 LINC01015 DDR1 HCG14 PPP1R18 SNORD32B MRPS18B TRIM10 FLOT1 HCG27 TUBB LOC554223 HLA-H PSORS1C3 PPP1R10 HLA-F-AS1 GNL1 TRIM27 LINC01623 RPP21 DHX16 HCG4B MOG OR12D2 C6orf136 ZNF311 LOC101929006 HCG20 POU5F1 OR2B3 OR2H1 VARS2 TRIM15 OR11A1 TRIM39-RPP21 ZNRD1ASP TRIM40 HCG4 ATAT1 MIR877 MUC21 NRM HCG8 MDC1 HLA-F HLA-G HCG18 PRR3 LOC105375014 OR2J2 MAS1L ZFP57 OR14J1 RNF39 HLA-E OR12D3 HCG16 MDC1-AS1 TRIM31-AS1 HLA-A TCF19 OR5V1
nsv1144137 Chr.6:29720323 - 31338123 on Build GRCh38 Deletion TRIM26 MIR4640 C6orf15 HLA-J IER3 TRIM39 ZNRD1 PSORS1C1 PPP1R11 TRIM31 HCG22 HCG17 HLA-L SFTA2 CCHCR1 ABCF1 MUC22 CDSN DPCR1 IFITM4P GTF2H4 HLA-K HCG9 LINC00243 HLA-C PSORS1C2 DDR1 PPP1R18 MRPS18B TRIM10 FLOT1 HCG27 TUBB LOC554223 HLA-H PSORS1C3 PPP1R10 HLA-F-AS1 GNL1 RPP21 DHX16 HCG4B C6orf136 HCG20 POU5F1 VARS2 TRIM15 TRIM39-RPP21 ZNRD1ASP TRIM40 HCG4 ATAT1 MIR877 MUC21 NRM HCG8 MDC1 HLA-F HLA-G HCG18 PRR3 LOC105375014 RNF39 HLA-E MDC1-AS1 TRIM31-AS1 HLA-A TCF19
nsv601264 Chr.6:29883666 - 31320716 on Build GRCh38 Loss TRIM26 MIR4640 C6orf15 HLA-J IER3 TRIM39 ZNRD1 PSORS1C1 PPP1R11 TRIM31 HCG22 HCG17 HLA-L SFTA2 CCHCR1 ABCF1 MUC22 CDSN DPCR1 GTF2H4 HLA-K HCG9 LINC00243 HLA-C PSORS1C2 DDR1 PPP1R18 MRPS18B TRIM10 FLOT1 HCG27 TUBB HLA-H PSORS1C3 PPP1R10 GNL1 RPP21 DHX16 HCG4B C6orf136 HCG20 POU5F1 VARS2 TRIM15 TRIM39-RPP21 ZNRD1ASP TRIM40 ATAT1 MIR877 MUC21 NRM HCG8 MDC1 HCG18 PRR3 LOC105375014 RNF39 HLA-E MDC1-AS1 TRIM31-AS1 HLA-A TCF19
esv2731791 Chr.6:30404802 - 31346410 on Build GRCh38 Deletion MIR4640 C6orf15 PSORS1C3 PPP1R10 GNL1 DHX16 IER3 C6orf136 HCG20 POU5F1 VARS2 PSORS1C1 HCG22 ATAT1 MIR877 MUC21 NRM MDC1 SFTA2 CCHCR1 ABCF1 PRR3 MUC22 LOC105375014 CDSN DPCR1 GTF2H4 LINC00243 HLA-C HLA-E PSORS1C2 DDR1 PPP1R18 MDC1-AS1 MRPS18B TCF19 FLOT1 HCG27 TUBB
esv2670269 Chr.6:30498650 - 31067145 on Build GRCh38 Deletion MIR4640 PPP1R10 GNL1 DHX16 IER3 C6orf136 HCG20 VARS2 HCG22 ATAT1 MIR877 MUC21 NRM MDC1 SFTA2 ABCF1 PRR3 MUC22 LOC105375014 DPCR1 GTF2H4 LINC00243 DDR1 PPP1R18 MDC1-AS1 MRPS18B FLOT1 TUBB
esv3411275 Chr.6:29981607 - 31490616 on Build GRCh38 Duplication TRIM26 MIR4640 C6orf15 LOC102725068 MICA HLA-J IER3 TRIM39 ZNRD1 PSORS1C1 PPP1R11 TRIM31 HCG22 HCG17 HLA-L SFTA2 CCHCR1 ABCF1 MUC22 CDSN DPCR1 GTF2H4 HLA-B LINC00243 HLA-C PSORS1C2 DDR1 PPP1R18 MRPS18B TRIM10 FLOT1 HCG27 TUBB PSORS1C3 PPP1R10 GNL1 RPP21 DHX16 C6orf136 HCG20 POU5F1 VARS2 TRIM15 TRIM39-RPP21 ZNRD1ASP TRIM40 ATAT1 HCG26 MIR877 MUC21 NRM HCG8 MDC1 HCG18 PRR3 LOC105375014 HCP5 MIR6891 RNF39 HLA-E MDC1-AS1 TRIM31-AS1 TCF19

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