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See other SAPCD1-AS1 CNV Assays ›
Gene Symbol
SAPCD1-AS1
Assay Reference Genome
Location

Chr.6:31765587 on build GRCh38
Cytoband
6p21.33
Assay ID Hs06799092_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 104413891

Gene Name:

 SAPCD1 antisense RNA 1

Gene Aliases:

 C6orf26-AS1

Location:

 Chr.6:31764135-31765588 on Build GRCh38

Assay Gene Location:

 Overlaps - Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SAPCD1-AS1 NR_126423.1
BM509003.1

Target Gene Details

Entrez Gene ID:

 80737

Gene Name:

 von Willebrand factor A domain containing 7

Gene Aliases:

 C6orf27, G7c, NG37

Location:

 Chr.6:31764135-31777331 on Build GRCh38

Assay Gene Location:

 Within Exon 16
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
VWA7 NM_025258.2 NP_079534.2
XM_005249427.2 16 2999 XP_005249484.1
XM_017011327.1 15 3034 XP_016866816.1
XM_017011328.1 16 3145 XP_016866817.1
XM_017011329.1 14 2543 XP_016866818.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion LY6G6D DXO TNXB C6orf10 HCG23 ATP6V1G2-DDX39B LOC101929163 SNORD48 DDX39B-AS1 DDX39B MCCD1 PRRC2A HCP5 MSH5 C6orf25 ATP6V1G2 C2-AS1 MICB VWA7 AGPAT1 ATF6B SNORD117 NFKBIL1 TNXA HCG26 LY6G6F AIF1 HLA-DRA NELFE GPSM3 PRRT1 HSPA1A BAG6 CFB MIR1236 MIR6832 PPT2 LTB GPANK1 EHMT2 APOM BTNL2 EGFL8 MSH5-SAPCD1 C2 SAPCD1-AS1 HLA-DRB6 SKIV2L LY6G5B SLC44A4 MIR6833 NOTCH4 CLIC1 DDAH2 LY6G6E CYP21A2 TNF LY6G6C AGER SNORD84 PPT2-EGFL8 CSNK2B LY6G5C MIR6721 CYP21A1P HSPA1B NEU1 SAPCD1 LSM2 C4A LST1 C4B LOC100507547 LOC100287329 ZBTB12 C6orf48 SNORA38 HLA-DRB1 SNORD52 LOC102725068 HSPA1L RNF5 VARS FKBPL MIR4646 PBX2 C6orf47 NCR3 ABHD16A HLA-DRB5 STK19 LTA
esv2763547 Chr.6:31748105 - 31770701 on Build GRCh38 Loss SAPCD1-AS1 MSH5 SAPCD1 VWA7 MSH5-SAPCD1
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss LY6G6D DXO TNXB ATP6V1G2-DDX39B SNORD48 DDX39B-AS1 DDX39B MCCD1 PRRC2A HCP5 MSH5 C6orf25 ATP6V1G2 C2-AS1 MICB VWA7 HLA-B SNORD117 NFKBIL1 TNXA HCG26 LY6G6F AIF1 MICA NELFE HSPA1A BAG6 CFB MIR1236 MIR6832 LTB GPANK1 EHMT2 APOM MSH5-SAPCD1 MIR6891 C2 SAPCD1-AS1 SKIV2L LY6G5B SLC44A4 CLIC1 DDAH2 LY6G6E CYP21A2 TNF LY6G6C SNORD84 CSNK2B LY6G5C CYP21A1P HSPA1B NEU1 SAPCD1 LSM2 C4A LST1 C4B LOC100287329 ZBTB12 C6orf48 SNORA38 SNORD52 LOC102725068 HSPA1L VARS MIR4646 C6orf47 NCR3 ABHD16A STK19 LTA
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion LY6G6D DXO KIFC1 HLA-DQA2 DAXX SLC39A7 ATP6V1G2-DDX39B LOC101929163 DDX39B-AS1 HLA-DQB2 RXRB PSMB8 VPS52 C6orf25 C2-AS1 VWA7 ATF6B SNORD117 HCG26 LY6G6F PHF1 GPSM3 PRRT1 HSPA1A B3GALT4 CFB MIR6873 HLA-DQB1-AS1 HLA-DOA PPT2 GPANK1 EHMT2 APOM PSMB8-AS1 HLA-DPB1 MSH5-SAPCD1 SAPCD1-AS1 HLA-DRB6 SKIV2L DDAH2 LY6G6E RGL2 HLA-DMB AGER SNORD84 CSNK2B HSPA1B NEU1 C4A LST1 WDR46 C4B TAPBP LOC100287329 ZBTB12 C6orf48 HCG24 HLA-DRB1 SNORD52 RNF5 FKBPL MIR4646 C6orf47 TAP2 PFDN6 MIR3135B HLA-DPA1 HLA-DRB5 STK19 LTA TNXB C6orf10 HCG23 MIR5004 SNORD48 DDX39B MCCD1 HLA-DMA PRRC2A HCP5 MSH5 HSD17B8 ATP6V1G2 MICB COL11A2 AGPAT1 BRD2 RPS18 NFKBIL1 TNXA AIF1 HLA-DRA NELFE BAG6 MIR1236 HLA-DPB2 MIR6832 LTB BTNL2 EGFL8 C2 HLA-DQB1 MIR219A1 PPP1R2P1 LY6G5B SLC44A4 MIR6833 NOTCH4 CLIC1 CYP21A2 TNF LY6G6C PPT2-EGFL8 LY6G5C PSMB9 MIR6721 CYP21A1P ZBTB9 SAPCD1 CUTA LSM2 LOC100507547 TAP1 RING1 SNORA38 LOC100294145 HLA-DOB SYNGAP1 LOC102725068 HSPA1L VARS PBX2 HCG25 MIR6834 HLA-DQA1 NCR3 ZBTB22 ABHD16A
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion LY6G6D DXO KIFC1 HLA-DQA2 DAXX SLC39A7 ATP6V1G2-DDX39B LOC101929163 DDX39B-AS1 HLA-DQB2 RXRB PSMB8 VPS52 C6orf25 C2-AS1 VWA7 ATF6B SNORD117 HCG26 LY6G6F PHF1 GPSM3 PRRT1 HSPA1A B3GALT4 CFB MIR6873 HLA-DQB1-AS1 HLA-DOA PPT2 GPANK1 EHMT2 APOM PSMB8-AS1 HLA-DPB1 MSH5-SAPCD1 SAPCD1-AS1 HLA-DRB6 SKIV2L DDAH2 LY6G6E RGL2 HLA-DMB AGER SNORD84 CSNK2B HSPA1B NEU1 C4A LST1 WDR46 C4B TAPBP LOC100287329 ZBTB12 C6orf48 HCG24 HLA-DRB1 SNORD52 RNF5 FKBPL MIR4646 C6orf47 TAP2 PFDN6 MIR3135B HLA-DPA1 HLA-DRB5 STK19 LTA TNXB C6orf10 HCG23 MIR5004 SNORD48 DDX39B MCCD1 HLA-DMA PRRC2A HCP5 MSH5 HSD17B8 ATP6V1G2 MICB COL11A2 AGPAT1 BRD2 RPS18 NFKBIL1 TNXA AIF1 HLA-DRA NELFE BAG6 MIR1236 HLA-DPB2 MIR6832 LTB BTNL2 EGFL8 C2 HLA-DQB1 MIR219A1 PPP1R2P1 LY6G5B SLC44A4 MIR6833 NOTCH4 CLIC1 CYP21A2 TNF LY6G6C PPT2-EGFL8 LY6G5C PSMB9 MIR6721 CYP21A1P ZBTB9 SAPCD1 CUTA LSM2 LOC100507547 TAP1 RING1 SNORA38 LOC100294145 HLA-DOB SYNGAP1 LOC102725068 HSPA1L VARS PBX2 HCG25 MIR6834 HLA-DQA1 NCR3 ZBTB22 ABHD16A
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss LY6G6D DXO TNXB C6orf10 HCG23 ATP6V1G2-DDX39B LOC101929163 SNORD48 DDX39B-AS1 DDX39B MCCD1 PRRC2A HCP5 MSH5 C6orf25 ATP6V1G2 C2-AS1 MICB VWA7 AGPAT1 ATF6B HLA-B SNORD117 NFKBIL1 TNXA HCG26 LY6G6F AIF1 MICA HLA-DRA NELFE GPSM3 PRRT1 HSPA1A BAG6 CFB MIR1236 MIR6832 PPT2 LTB GPANK1 EHMT2 APOM BTNL2 EGFL8 MSH5-SAPCD1 MIR6891 C2 SAPCD1-AS1 SKIV2L LY6G5B SLC44A4 MIR6833 NOTCH4 CLIC1 DDAH2 LY6G6E CYP21A2 TNF LY6G6C AGER SNORD84 PPT2-EGFL8 CSNK2B LY6G5C MIR6721 CYP21A1P HSPA1B NEU1 SAPCD1 LSM2 C4A LST1 C4B LOC100507547 LOC100287329 ZBTB12 C6orf48 SNORA38 SNORD52 LOC102725068 HSPA1L RNF5 VARS FKBPL MIR4646 PBX2 C6orf47 NCR3 ABHD16A STK19 LTA

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More Information


Set Membership:

 Intragenic Exonic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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