Hs06844977_cn

• Gene Symbol: SPACA9
• Assay Reference Genome Location: Chr.9:132886145 on build GRCh38
• Cytoband: 9q34.13

Target Gene Details

• Entrez Gene ID: 11092
• Gene Name: sperm acrosome associated 9
• Gene Aliases: C9orf9, Mast
• Location: Chr.9:132878320-132890314 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SPACA9	NM_001316897.1			NP_001303826.1
	NM_001316898.1			NP_001303827.1
	NM_001316900.1			NP_001303829.1
	NM_018956.4			NP_061829.3
	NR_133631.1
	XM_017014231.1			XP_016869720.1
	AJ011375.1			CAB66158.1
	AK075259.1			BAC11503.1
	BC012940.1			AAH12940.1
	CK906174.1
	CK906175.1
	CR457210.1			CAG33491.1
	DA134573.1
	DA281620.1
	HY024188.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3621926	Chr.9:132884570 - 132886716 on Build GRCh38	Loss	SPACA9
nsv831743	Chr.9:132820292 - 132982548 on Build GRCh38	Loss	TSC1 AK8 SPACA9 MIR548AW GFI1B
esv2739138	Chr.9:132727483 - 135521553 on Build GRCh38	Deletion	REXO4 AK8 BRD3 SNORD141A GTF3C5 LINC00094 GBGT1 SNORD36A SNORD36C ABO MIR3689E TSC1 OLFM1 MIR548AW FCN2 MIR4669 SURF1 DBH-AS1 ADAMTSL2 LOC401557 SURF2 RALGDS SPACA9 WDR5 COL5A1 C9orf116 MIR3689F LOC100130548 PPP1R26 VAV2 SNORD36B MIR3689A TMEM8C SURF6 PPP1R26-AS1 LOC101928193 RNU6ATAC LOC101928525 RXRA MRPS2 SNORD24 GFI1B FCN1 LOC101448202 MIR3689D2 DBH LOC105376306 ADAMTS13 LCN1 CEL RPL7A MIR3689D1 SARDH LOC100996574 CACFD1 STKLD1 SLC2A6 FAM163B OBP2B MED22 C9orf62 MIR3689C MIR3689B COL5A1-AS1 SURF4 CELP MIR6877
esv3621927	Chr.9:132885654 - 132894812 on Build GRCh38	Gain	TSC1 SPACA9

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Function(s)

protein binding
calcium-dependent protein binding