Genomic Map
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Target Gene Details
Entrez Gene ID: | 341346 |
Gene Name: | single-pass membrane protein with coiled-coil domains 2 |
Gene Aliases: |
C12orf70 |
Location: |
Chr.12:27446482-27506911 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| SMCO2 | XM_011520634.2 | XP_011518936.1 | ||
| XM_011520636.2 | XP_011518938.1 | |||
| XM_017019254.1 | XP_016874743.1 | |||
| XM_017019255.1 | XP_016874744.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| dgv1406n100 | Chr.12:27128236 - 27640822 on Build GRCh38 | Gain |
 ARNTL2
SMCO2
STK38L
ARNTL2-AS1
PPFIBP1
|
| dgv2417n54 | Chr.12:27068022 - 27638988 on Build GRCh38 | Gain |
C12orf71
ARNTL2
SMCO2
STK38L
ARNTL2-AS1
PPFIBP1
|
| nsv436825 | Chr.12:27135971 - 27642579 on Build GRCh38 | Insertion |
ARNTL2
SMCO2
STK38L
ARNTL2-AS1
PPFIBP1
|
| esv2745664 | Chr.12:27017516 - 27820117 on Build GRCh38 | Deletion |
C12orf71
REP15
MED21
KLHL42
ARNTL2
SMCO2
STK38L
MRPS35
ARNTL2-AS1
MANSC4
PPFIBP1
|
| esv3628940 | Chr.12:27451350 - 27631744 on Build GRCh38 | Gain |
SMCO2
PPFIBP1
|
| nsv521872 | Chr.12:27114021 - 27635541 on Build GRCh38 | Gain |
ARNTL2
SMCO2
STK38L
ARNTL2-AS1
PPFIBP1
|
| dgv271e199 | Chr.12:27089700 - 27631451 on Build GRCh38 | Deletion |
ARNTL2
SMCO2
STK38L
ARNTL2-AS1
PPFIBP1
|
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Intragenic