Hs07090127_cn

• Gene Symbol: SLC38A6
• Assay Reference Genome Location: Chr.14:60987089 on build GRCh38
• Cytoband: 14q23.1

Target Gene Details

• Entrez Gene ID: 145389
• Gene Name: solute carrier family 38 member 6
• Gene Aliases: NAT-1, SNAT6
• Location: Chr.14:60981114-61083733 on Build GRCh38
• Assay Gene Location: Within Intron 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC38A6	NM_001172702.1			NP_001166173.1
	NM_153811.2			NP_722518.2
	NR_033344.1
	XM_006720049.3			XP_006720112.1
	XM_011536469.2			XP_011534771.1
	XM_017021020.1			XP_016876509.1
	XM_017021021.1			XP_016876510.1
	XM_017021022.1			XP_016876511.1
	XM_017021023.1			XP_016876512.1
	XM_017021024.1			XP_016876513.1
	XM_017021025.1			XP_016876514.1
	XM_017021026.1			XP_016876515.1
	AF070578.1
	AF543422.1			AAN47144.1
	AK303839.1
	BC110378.1
	BP352279.1
	BX248072.1			CAD62361.1
	BX648332.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3634678	Chr.14:60985790 - 60988405 on Build GRCh38	Loss	SLC38A6
esv2748755	Chr.14:60887693 - 61016326 on Build GRCh38	Deletion	SLC38A6 TRMT5 MNAT1
nsv1037387	Chr.14:60742756 - 61066784 on Build GRCh38	Gain	SLC38A6 TRMT5 MNAT1
esv2656644	Chr.14:60985751 - 60988428 on Build GRCh38	Deletion	SLC38A6
nsv564881	Chr.14:60457291 - 61377535 on Build GRCh38	Gain	SIX1 SALRNA1 TMEM30B C14orf39 SLC38A6 PRKCH SIX4 TRMT5 SIX6 LOC105378189 MNAT1
nsv1049936	Chr.14:60934305 - 61080658 on Build GRCh38	Loss	SLC38A6 TRMT5 MNAT1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

amino acid transporter

Gene Ontology Categories:

Process(es)

amino acid transmembrane transport
sodium ion transport
amino acid transport

Function(s)

amino acid transmembrane transporter activity