Hs07122442_cn

• Gene Symbol: NFIX
• Assay Reference Genome Location: Chr.19:13017963 on build GRCh38
• Cytoband: 19p13.13

Target Gene Details

• Entrez Gene ID: 4784
• Gene Name: nuclear factor I X
• Gene Aliases: MRSHSS, NF1A, SOTOS2
• Location: Chr.19:12995512-13098796 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
NFIX	NM_002501.3			NP_002492.2
	XM_005259918.4			XP_005259975.1
	XM_017026837.1			XP_016882326.1
	BF115883.1
	BT019732.1			AAV38537.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv828444	Chr.19:13012681 - 13027353 on Build GRCh38	Loss	NFIX
nsv1055900	Chr.19:12979147 - 13034197 on Build GRCh38	Gain	NFIX
nsv953977	Chr.19:12666887 - 13095486 on Build GRCh38	Deletion	MIR6515 WDR83OS DHPS MIR5695 PRDX2 SNORD41 NFIX JUNB RTBDN LOC105372280 MIR5684 GADD45GIP1 SNORD135 SYCE2 KLF1 HOOK2 GCDH MIR6794 WDR83 BEST2 FARSA DAND5 FBXW9 RAD23A RNASEH2A DNASE2 CALR MAST1 ASNA1 C19orf43 TNPO2
nsv2422	Chr.19:13000362 - 13032711 on Build GRCh38	Insertion	NFIX
nsv833754	Chr.19:12876208 - 13028186 on Build GRCh38	Loss	MIR6515 DNASE2 MIR5695 FARSA NFIX CALR SYCE2 DAND5 KLF1 RAD23A GADD45GIP1 GCDH
esv275430	Chr.19:13015145 - 13020565 on Build GRCh38	Gain+Loss	NFIX

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

DNA-binding transcription factor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
DNA replication
transcription from RNA polymerase II promoter
positive regulation of transcription from RNA polymerase II promoter

Function(s)

DNA binding
transcription factor activity, sequence-specific DNA binding
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
protein binding