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See other PRPF31 CNV Assays ›
Gene Symbol
PRPF31
Assay Reference Genome
Location

Chr.19:54116629 on build GRCh38
Cytoband
19q13.42
Assay ID Hs07130003_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 26121

Gene Name:

 pre-mRNA processing factor 31

Gene Aliases:

 NY-BR-99, PRP31, RP11, SNRNP61

Location:

 Chr.19:54115410-54131719 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PRPF31 NM_015629.3 NP_056444.3
XM_006723137.3 XP_006723200.1
AB593024.1 1 829
AB593025.1
AK098547.1 BAC05329.1
AK301709.1
AL050369.1 CAB43677.1
AY040822.1 AAK77986.1
BC117389.1
CN306666.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv510773 Chr.19:54017180 - 54132236 on Build GRCh38 Deletion PRPF31 VSTM1 OSCAR NDUFA3 TARM1 TFPT
nsv515623 Chr.19:54102901 - 54179150 on Build GRCh38 Loss PRPF31 TMC4 MBOAT7 LENG1 CNOT3 NDUFA3 TFPT
nsv953613 Chr.19:54097214 - 54198733 on Build GRCh38 Deletion PRPF31 TMC4 MBOAT7 TSEN34 OSCAR LENG1 CNOT3 NDUFA3 TFPT
esv2718812 Chr.19:53184636 - 54322450 on Build GRCh38 Deletion MIR518A1 BIRC8 MIR515-2 MIR520G MBOAT7 MIR526A2 MIR519C MIR518C ZNF665 TPM3P9 MIR1283-2 CACNG8 LOC284379 ZNF845 TSEN34 LILRA6 OSCAR MIR526A1 MIR518A2 MIR519D MIR525 ZNF818P MIR521-1 MIR524 LOC105372457 MIR519A1 CACNG6 ZNF761 VN1R4 CNOT3 MIR520F MIR1283-1 VN1R2 MIR519A2 MIR523 VSTM1 MIR516B2 DPRX LILRB5 NDUFA3 MIR516A2 LILRA5 MIR518B MIR517A ZNF677 PRPF31 MIR518E MIR520C MIR516B1 MIR526B MIR518D MIR373 MIR521-2 LILRB3 MIR4752 FAM90A27P ZNF813 MIR520H TMC4 CACNG7 ZNF525 MIR520B LENG1 MYADM TARM1 TFPT MIR517C ZNF765 MIR512-2 MIR520D MIR520A MIR371A MIR516A1 MIR515-1 MIR498 MIR527 MIR371B MIR519E MIR512-1 LILRB2 MIR519B MIR517B MIR935 MIR518F NLRP12 MIR372 ZNF331 RPS9 PRKCG MIR522 MIR520E MIR1323
nsv470157 Chr.19:54063999 - 54127773 on Build GRCh38 Loss PRPF31 OSCAR NDUFA3 TARM1 TFPT
nsv833877 Chr.19:53951529 - 54117323 on Build GRCh38 Loss PRPF31 CACNG6 VSTM1 MIR935 OSCAR NDUFA3 TARM1 CACNG8 TFPT

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