Genomic Map
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Target Gene Details
Entrez Gene ID: | 284415 |
Gene Name: | V-set and transmembrane domain containing 1 |
Gene Aliases: |
SIRL-1, SIRL1, UNQ3033 |
Location: |
Chr.19:54040825-54063966 on Build GRCh38 |
Assay Gene Location: | Within Intron 7 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| VSTM1 | NM_001288791.1 | NP_001275720.1 | ||
| NM_001288792.1 | NP_001275721.1 | |||
| NM_001288793.1 | NP_001275722.1 | |||
| NM_198481.3 | NP_940883.2 | |||
| NR_110142.1 | ||||
| XM_011526845.1 | XP_011525147.1 | |||
| XM_011526846.1 | XP_011525148.1 | |||
| XM_011526847.1 | XP_011525149.1 | |||
| XM_011526848.1 | XP_011525150.1 | |||
| XM_011526849.1 | XP_011525151.1 | |||
| XM_017026666.1 | XP_016882155.1 | |||
| AY358542.1 | AAQ88906.1 | |||
| BC100943.2 | AAI00944.1 | |||
| BQ446114.1 | ||||
| DQ479397.1 | ||||
| FJ584316.1 | ||||
| FJ584317.1 | ||||
| FJ584318.1 | ||||
| FJ584319.1 | ||||
| FJ584320.1 | ||||
| FJ882051.1 | ||||
| FN398145.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv458782 | Chr.19:53961144 - 54093354 on Build GRCh38 | Gain |
 CACNG8
TARM1
MIR935
VSTM1
CACNG6
|
| nsv510773 | Chr.19:54017180 - 54132236 on Build GRCh38 | Deletion |
NDUFA3
TARM1
PRPF31
TFPT
VSTM1
OSCAR
|
| nsv1063127 | Chr.19:53926876 - 54068977 on Build GRCh38 | Gain |
CACNG8
CACNG7
MIR935
VSTM1
CACNG6
|
| nsv1057516 | Chr.19:53986233 - 54046901 on Build GRCh38 | Gain |
CACNG8
VSTM1
CACNG6
|
| esv2718812 | Chr.19:53184636 - 54322450 on Build GRCh38 | Deletion |
MIR520B
MIR373
ZNF677
MIR498
MIR526A1
MIR518D
DPRX
MIR520A
MIR520F
LILRB3
BIRC8
MIR518E
MIR516A2
ZNF525
MIR519E
MIR519D
MIR526B
TSEN34
ZNF761
MIR519B
MIR1283-1
MIR372
MIR4752
TMC4
MIR526A2
VN1R2
MIR521-1
LILRB2
MIR518C
TARM1
MIR518F
MIR520C
MIR515-1
PRKCG
MIR521-2
MIR371A
LOC105372457
TFPT
RPS9
MIR512-2
MIR519A1
MIR1323
LILRA6
MIR517A
OSCAR
MIR524
CACNG8
ZNF845
LILRA5
MIR935
CNOT3
MIR516A1
FAM90A27P
VN1R4
MIR516B1
VSTM1
ZNF665
NLRP12
MIR516B2
NDUFA3
MIR517B
ZNF813
LOC284379
CACNG7
MIR520H
CACNG6
MIR512-1
PRPF31
ZNF765
MIR520E
ZNF818P
LILRB5
MIR1283-2
MIR518A2
ZNF331
MYADM
MIR527
MIR518A1
MIR520D
MBOAT7
MIR518B
LENG1
MIR519C
MIR522
MIR515-2
MIR523
MIR517C
MIR519A2
TPM3P9
MIR525
MIR520G
MIR371B
|
| nsv833877 | Chr.19:53951529 - 54117323 on Build GRCh38 | Loss |
CACNG8
NDUFA3
TARM1
PRPF31
TFPT
MIR935
VSTM1
CACNG6
OSCAR
|
Back To TopMore Information
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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