Genomic Map
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Target Gene Details
Entrez Gene ID: | 284415 |
Gene Name: | V-set and transmembrane domain containing 1 |
Gene Aliases: |
SIRL-1, SIRL1, UNQ3033 |
Location: |
Chr.19:54040825-54063966 on Build GRCh38 |
Assay Gene Location: | Within Intron 6 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| VSTM1 | NM_001288791.1 | NP_001275720.1 | ||
| NM_001288792.1 | NP_001275721.1 | |||
| NM_001288793.1 | NP_001275722.1 | |||
| NM_198481.3 | NP_940883.2 | |||
| NR_110142.1 | ||||
| XM_011526845.1 | XP_011525147.1 | |||
| XM_011526846.1 | XP_011525148.1 | |||
| XM_011526847.1 | XP_011525149.1 | |||
| XM_011526848.1 | XP_011525150.1 | |||
| XM_011526849.1 | XP_011525151.1 | |||
| XM_017026666.1 | XP_016882155.1 | |||
| AY358542.1 | AAQ88906.1 | |||
| BC100943.2 | AAI00944.1 | |||
| BQ446114.1 | ||||
| DQ479397.1 | ||||
| FJ584316.1 | ||||
| FJ584317.1 | ||||
| FJ584318.1 | ||||
| FJ584319.1 | ||||
| FJ584320.1 | ||||
| FJ882051.1 | ||||
| FN398145.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv458782 | Chr.19:53961144 - 54093354 on Build GRCh38 | Gain |
 VSTM1
CACNG6
TARM1
MIR935
CACNG8
|
| nsv510773 | Chr.19:54017180 - 54132236 on Build GRCh38 | Deletion |
NDUFA3
VSTM1
TARM1
PRPF31
OSCAR
TFPT
|
| nsv1063127 | Chr.19:53926876 - 54068977 on Build GRCh38 | Gain |
CACNG7
VSTM1
CACNG6
MIR935
CACNG8
|
| esv2718812 | Chr.19:53184636 - 54322450 on Build GRCh38 | Deletion |
ZNF818P
CACNG7
MIR518F
LILRA6
ZNF677
MIR517B
LILRB5
MIR518C
TSEN34
CNOT3
MIR515-2
MIR1323
MIR516B2
MIR526B
TMC4
MIR520G
MIR519A1
MIR519D
OSCAR
LOC105372457
MIR516A1
MIR522
MIR518A2
MYADM
MIR526A2
MIR520F
LILRB2
VN1R2
BIRC8
MIR518D
MIR935
ZNF665
PRPF31
LOC284379
TFPT
MIR520E
MIR519A2
MIR515-1
MIR516B1
MIR1283-1
CACNG8
MIR512-2
ZNF761
LILRB3
ZNF845
MIR526A1
NDUFA3
PRKCG
MIR373
CACNG6
TARM1
MIR498
MIR518B
ZNF331
MIR520A
MIR519C
MIR524
MIR518A1
MIR521-1
MIR371A
MIR525
MIR516A2
RPS9
VN1R4
TPM3P9
DPRX
MIR512-1
MIR520D
MIR520H
LENG1
MIR527
MIR521-2
MIR1283-2
MIR371B
VSTM1
MIR518E
MBOAT7
MIR523
ZNF813
MIR520B
MIR517A
MIR517C
MIR4752
MIR519E
MIR519B
MIR372
NLRP12
LILRA5
MIR520C
ZNF525
FAM90A27P
ZNF765
|
| dgv6541n54 | Chr.19:54049610 - 54057172 on Build GRCh38 | Loss |
VSTM1
|
| nsv833877 | Chr.19:53951529 - 54117323 on Build GRCh38 | Loss |
NDUFA3
VSTM1
CACNG6
TARM1
MIR935
PRPF31
OSCAR
CACNG8
TFPT
|
Back To TopMore Information
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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