Hs07141953_cn

• Gene Symbol: NFIX
• Assay Reference Genome Location: Chr.19:13022895 on build GRCh38
• Cytoband: 19p13.13

Target Gene Details

• Entrez Gene ID: 4784
• Gene Name: nuclear factor I X
• Gene Aliases: MRSHSS, NF1A, SOTOS2
• Location: Chr.19:12995512-13098796 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
NFIX	NM_002501.3			NP_002492.2
	XM_005259918.4			XP_005259975.1
	XM_017026837.1			XP_016882326.1
	BF115883.1
	BT019732.1			AAV38537.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv828444	Chr.19:13012681 - 13027353 on Build GRCh38	Loss	NFIX
nsv1055900	Chr.19:12979147 - 13034197 on Build GRCh38	Gain	NFIX
nsv953977	Chr.19:12666887 - 13095486 on Build GRCh38	Deletion	CALR LOC105372280 BEST2 TNPO2 ASNA1 RNASEH2A JUNB RTBDN NFIX GCDH DNASE2 SNORD135 MAST1 RAD23A WDR83 SYCE2 MIR5684 GADD45GIP1 FBXW9 DHPS C19orf43 PRDX2 FARSA KLF1 MIR6794 WDR83OS MIR6515 MIR5695 DAND5 SNORD41 HOOK2
nsv2422	Chr.19:13000362 - 13032711 on Build GRCh38	Insertion	NFIX
nsv833754	Chr.19:12876208 - 13028186 on Build GRCh38	Loss	MIR5695 DAND5 CALR GADD45GIP1 RAD23A FARSA SYCE2 KLF1 NFIX GCDH DNASE2 MIR6515

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

DNA-binding transcription factor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
DNA replication
transcription from RNA polymerase II promoter
positive regulation of transcription from RNA polymerase II promoter

Function(s)

DNA binding
transcription factor activity, sequence-specific DNA binding
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
protein binding