Hs07153791_cn

• Gene Symbol: NFIX
• Assay Reference Genome Location: Chr.19:13015898 on build GRCh38
• Cytoband: 19p13.13

Target Gene Details

• Entrez Gene ID: 4784
• Gene Name: nuclear factor I X
• Gene Aliases: MRSHSS, NF1A, SOTOS2
• Location: Chr.19:12995512-13098796 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
NFIX	NM_002501.3			NP_002492.2
	XM_005259918.4			XP_005259975.1
	XM_017026837.1			XP_016882326.1
	BF115883.1
	BT019732.1			AAV38537.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv828444	Chr.19:13012681 - 13027353 on Build GRCh38	Loss	NFIX
nsv1055900	Chr.19:12979147 - 13034197 on Build GRCh38	Gain	NFIX
nsv953977	Chr.19:12666887 - 13095486 on Build GRCh38	Deletion	RNASEH2A FARSA PRDX2 JUNB DNASE2 GCDH MIR5684 RTBDN RAD23A SYCE2 KLF1 NFIX CALR GADD45GIP1 SNORD41 MIR6794 MIR6515 MAST1 DHPS C19orf43 LOC105372280 WDR83OS TNPO2 MIR5695 WDR83 ASNA1 BEST2 SNORD135 DAND5 HOOK2 FBXW9
nsv2422	Chr.19:13000362 - 13032711 on Build GRCh38	Insertion	NFIX
nsv833754	Chr.19:12876208 - 13028186 on Build GRCh38	Loss	MIR5695 GADD45GIP1 FARSA MIR6515 RAD23A DAND5 DNASE2 SYCE2 GCDH KLF1 NFIX CALR
esv275430	Chr.19:13015145 - 13020565 on Build GRCh38	Gain+Loss	NFIX

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

DNA-binding transcription factor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
DNA replication
transcription from RNA polymerase II promoter
positive regulation of transcription from RNA polymerase II promoter

Function(s)

DNA binding
transcription factor activity, sequence-specific DNA binding
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
protein binding