Hs07155124_cn

• Gene Symbol: NFIX
• Assay Reference Genome Location: Chr.19:13006366 on build GRCh38
• Cytoband: 19p13.13

Target Gene Details

• Entrez Gene ID: 4784
• Gene Name: nuclear factor I X
• Gene Aliases: MRSHSS, NF1A, SOTOS2
• Location: Chr.19:12995512-13098796 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
NFIX	NM_002501.3			NP_002492.2
	XM_005259918.4			XP_005259975.1
	XM_017026837.1			XP_016882326.1
	BF115883.1
	BT019732.1			AAV38537.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1055900	Chr.19:12979147 - 13034197 on Build GRCh38	Gain	NFIX
nsv953977	Chr.19:12666887 - 13095486 on Build GRCh38	Deletion	GCDH RNASEH2A DHPS GADD45GIP1 DAND5 MIR6794 KLF1 PRDX2 BEST2 C19orf43 MIR6515 SYCE2 TNPO2 RAD23A CALR WDR83 JUNB DNASE2 FBXW9 ASNA1 NFIX WDR83OS LOC105372280 RTBDN SNORD135 MIR5695 MIR5684 SNORD41 FARSA HOOK2 MAST1
nsv2422	Chr.19:13000362 - 13032711 on Build GRCh38	Insertion	NFIX
nsv833754	Chr.19:12876208 - 13028186 on Build GRCh38	Loss	MIR5695 GCDH DNASE2 GADD45GIP1 DAND5 NFIX KLF1 MIR6515 SYCE2 RAD23A CALR FARSA

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

DNA-binding transcription factor

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
DNA replication
transcription from RNA polymerase II promoter
positive regulation of transcription from RNA polymerase II promoter

Function(s)

DNA binding
transcription factor activity, sequence-specific DNA binding
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
protein binding