Hs07155473_cn

• Gene Symbol: HOMER3
• Assay Reference Genome Location: Chr.19:18939924 on build GRCh38
• Cytoband: 19p13.11

Target Gene Details

• Entrez Gene ID: 9454
• Gene Name: homer scaffolding protein 3
• Gene Aliases: HOMER-3, VESL3
• Location: Chr.19:18929201-18941258 on Build GRCh38
• Assay Gene Location: Overlaps Intron 3 - Exon 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
HOMER3	NM_001145721.1			NP_001139193.1
	NM_001145722.1			NP_001139194.1
	NM_004838.3			NP_004829.3
	XM_006722943.1			XP_006723006.1
	XM_006722944.1			XP_006723007.1
	AF093265.1			AAC71029.1
	AK313995.1
	AL529052.3
	AW606967.1
	BC012113.1			AAH12113.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2667412	Chr.19:18938136 - 18941983 on Build GRCh38	Deletion	LOC102724360 HOMER3
nsv470132	Chr.19:18853633 - 18943911 on Build GRCh38	Loss	UPF1 LOC102724360 HOMER3 DDX49 COPE GDF1 CERS1
nsv833778	Chr.19:18901860 - 19090678 on Build GRCh38	Loss	SLC25A42 ARMC6 LOC102724360 HOMER3 DDX49 COPE SUGP2
nsv1151217	Chr.19:18627369 - 19284914 on Build GRCh38	Deletion	SUGP1 SLC25A42 NR2C2AP HAPLN4 BORCS8-MEF2B LOC102724360 KLHL26 TM6SF2 HOMER3 COPE MEF2B BORCS8 UPF1 TMEM161A CRTC1 ARMC6 COMP NCAN DDX49 GDF1 SUGP2 RFXANK CERS1
nsv952423	Chr.19:18859292 - 18941091 on Build GRCh38	Deletion	UPF1 LOC102724360 HOMER3 DDX49 COPE GDF1 CERS1

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

protein targeting
G-protein coupled glutamate receptor signaling pathway

Function(s)

protein binding
protein C-terminus binding
protein domain specific binding
G-protein coupled glutamate receptor binding